ModCRE DB

Transcription factor

B3KNJ7

cDNA FLJ14703 fis, clone NT2RP3000512, highly similar to Homeobox protein Hox-B3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 431 aa

146 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)22
MotifPredictionSourceDNA bindingSupportLogoActions
MA0903.1 NN 70+% JASPAR ACTAATTAGC 99.5% identity Open · Scan
MA0902.1 NN 70+% JASPAR AGTAATTAAC 76.7% identity Open · Scan
M00403_2.00 NN 70+% CisBP CTAATTACC 75.8% identity Open · Scan
MA0900.1 NN 70+% JASPAR CCTAATTACC 75.8% identity Open · Scan
MA1504.1 NN 70+% JASPAR GTCATTAA 75.4% identity Open · Scan
M06227_2.00 NN 70+% CisBP TTAATTAT 74.5% identity Open · Scan
MA1496.1 NN 70+% JASPAR GTCATTAG 74.5% identity Open · Scan
MA0132.2 NN 70+% JASPAR GTAATTAG 74.1% identity Open · Scan
M00422_2.00 NN 70+% CisBP TTAATGA 73.7% identity Open · Scan
MA0158.1 NN 70+% JASPAR CACTAATT 73.4% identity Open · Scan
MA0904.1 NN 70+% JASPAR ACGGTAATTAGCTCAT 73.4% identity Open · Scan
MA0904.2 NN 70+% JASPAR GTAATTAC 73.4% identity Open · Scan
M02166_2.00 NN 70+% CisBP CTAATTAC 73.2% identity Open · Scan
M06545_2.00 NN 70+% CisBP TTAATTA 73.2% identity Open · Scan
M06261_2.00 NN 70+% CisBP TTAATTA 72.2% identity Open · Scan
MA1507.1 NN 70+% JASPAR ATCATTAG 71.4% identity Open · Scan
M00494_2.00 NN 70+% CisBP TTAATTACC 71.1% identity Open · Scan
M03799_2.00 NN 70+% CisBP GTAATTAC 71.1% identity Open · Scan
M06248_2.00 NN 70+% CisBP TAATTGCC 71.1% identity Open · Scan
MA1497.1 NN 70+% JASPAR GGTAATTAAC 71.1% identity Open · Scan
MA0594.1 NN 70+% JASPAR GCCATAAATCA 70.3% identity Open · Scan
MA0594.2 NN 70+% JASPAR GTCGTAAACG 70.3% identity Open · Scan
Nearest Neighbor (70% - 40%)124
MotifPredictionSourceDNA bindingSupportLogoActions
M04959_2.00 NN 70-40% CisBP GTAATTAC 68.4% identity Open · Scan
M09196_2.00 NN 70-40% CisBP TTGATGGATG 68.4% identity Open · Scan
M09680_2.00 NN 70-40% CisBP TTAATTA 68.4% identity Open · Scan
MA1495.1 NN 70-40% JASPAR GTAATTAC 68.4% identity Open · Scan
MA1498.1 NN 70-40% JASPAR GCAATTAC 67.7% identity Open · Scan
MA1500.1 NN 70-40% JASPAR TTAATTAC 67.7% identity Open · Scan
M02150_2.00 NN 70-40% CisBP TTAATTAA 67.2% identity Open · Scan
M06329_2.00 NN 70-40% CisBP CACTAATTA 67.2% identity Open · Scan
M00469_2.00 NN 70-40% CisBP TTAATTACC 66.6% identity Open · Scan
MA0893.1 NN 70-40% JASPAR ACTAATTAAA 66.6% identity Open · Scan
MA1499.1 NN 70-40% JASPAR ATCATTAG 66.2% identity Open · Scan
M05105_2.00 NN 70-40% CisBP GTCGTAAAAT 66.1% identity Open · Scan
M05272_2.00 NN 70-40% CisBP TTAACGAG 66.1% identity Open · Scan
M06549_2.00 NN 70-40% CisBP TTAATGA 66.1% identity Open · Scan
M09206_2.00 NN 70-40% CisBP CATTAATCAA 66.1% identity Open · Scan
MA0485.1 NN 70-40% JASPAR GGCCATAAATCAC 66.1% identity Open · Scan
MA0485.2 NN 70-40% JASPAR GTCGTAAAAT 66.1% identity Open · Scan
MA0913.1 NN 70-40% JASPAR GCAATAAAAA 66.1% identity Open · Scan
MA0913.2 NN 70-40% JASPAR GCAATAAAAC 66.1% identity Open · Scan
MA1501.1 NN 70-40% JASPAR GGTAATTAAC 66.1% identity Open · Scan
M00410_2.00 NN 70-40% CisBP TTTTATGACC 65.6% identity Open · Scan
M00476_2.00 NN 70-40% CisBP TTAATGGCC 65.6% identity Open · Scan
MA1503.1 NN 70-40% JASPAR GTCGTAAAAT 65.6% identity Open · Scan
M06544_2.00 NN 70-40% CisBP GTAATTA 65.0% identity Open · Scan
MA0132.1 NN 70-40% JASPAR CTAATT 63.0% identity Open · Scan
M03253_2.00 NN 70-40% CisBP TTTTTATTAC 62.9% identity Open · Scan
MA0905.1 NN 70-40% JASPAR GTCGTAAAAT 62.9% identity Open · Scan
MA1506.1 NN 70-40% JASPAR GGTCGTAAAAC 62.9% identity Open · Scan
M09204_2.00 NN 70-40% CisBP TTAATGGC 62.7% identity Open · Scan
M06281_2.00 NN 70-40% CisBP TTAATTA 62.5% identity Open · Scan
M00392_2.00 NN 70-40% CisBP TTAATTAC 62.3% identity Open · Scan
M00391_2.00 NN 70-40% CisBP TTAATTGCC 61.8% identity Open · Scan
MA1505.1 NN 70-40% JASPAR GTAATTAC 61.8% identity Open · Scan
M05312_2.00 NN 70-40% CisBP TTAACGAC 61.4% identity Open · Scan
MA0910.1 NN 70-40% JASPAR TAAATAATTAATGGCTA 61.4% identity Open · Scan
MA0910.2 NN 70-40% JASPAR GCAATTAC 61.4% identity Open · Scan
M00492_2.00 NN 70-40% CisBP TAATTAGC 61.2% identity Open · Scan
M05100_2.00 NN 70-40% CisBP TTAACGAC 61.2% identity Open · Scan
M05394_2.00 NN 70-40% CisBP GGTCGTAAAAC 61.1% identity Open · Scan
M09170_2.00 NN 70-40% CisBP TCATAAATCATC 61.1% identity Open · Scan
MA0899.1 NN 70-40% JASPAR GGTAATAAAAA 61.1% identity Open · Scan
M00388_2.00 NN 70-40% CisBP CTAATTGCTT 60.9% identity Open · Scan
MA0707.1 NN 70-40% JASPAR GGTAATTAAA 60.9% identity Open · Scan
M09582_2.00 NN 70-40% CisBP ATGATTGATG 60.8% identity Open · Scan
M00462_2.00 NN 70-40% CisBP CTAATTG 60.7% identity Open · Scan
M06241_2.00 NN 70-40% CisBP CGTTAATTATTT 60.7% identity Open · Scan
MA0890.1 NN 70-40% JASPAR ACCAATTAGC 60.7% identity Open · Scan
MA1473.1 NN 70-40% JASPAR GGCAATAAAAC 59.6% identity Open · Scan
M03104_2.00 NN 70-40% CisBP TTAATTACGGTAATTAC 59.2% identity Open · Scan
M03271_2.00 NN 70-40% CisBP GTAATTAC 59.2% identity Open · Scan
MA0706.1 NN 70-40% JASPAR AGTAATTAAC 59.2% identity Open · Scan
M06232_2.00 NN 70-40% CisBP TTAATGA 58.9% identity Open · Scan
MA0876.1 NN 70-40% JASPAR CCAATTAA 58.9% identity Open · Scan
MA0887.1 NN 70-40% JASPAR GGTAATTAGC 58.9% identity Open · Scan
MA0888.1 NN 70-40% JASPAR GGTAATTAGC 58.9% identity Open · Scan
M06312_2.00 NN 70-40% CisBP TTAATTA 58.6% identity Open · Scan
M02214_2.00 NN 70-40% CisBP AATAATTATA 58.1% identity Open · Scan
M03775_2.00 NN 70-40% CisBP GTTTTATGTGTTTT 58.1% identity Open · Scan
M05057_2.00 NN 70-40% CisBP TTAATTAC 58.1% identity Open · Scan
MA0661.1 NN 70-40% JASPAR GCTAATTAAC 57.8% identity Open · Scan
M03832_2.00 NN 70-40% CisBP GGTAATTACC 57.4% identity Open · Scan
M03276_2.00 NN 70-40% CisBP GCTAATTAGC 57.1% identity Open · Scan
M03798_2.00 NN 70-40% CisBP GGTAATTAGC 57.1% identity Open · Scan
MA0642.1 NN 70-40% JASPAR CCCAATTAGC 57.1% identity Open · Scan
MA0889.1 NN 70-40% JASPAR ACTAATTAGC 56.9% identity Open · Scan
MA1502.1 NN 70-40% JASPAR GCAATTAC 56.9% identity Open · Scan
M02205_2.00 NN 70-40% CisBP CATTAATTACC 55.9% identity Open · Scan
M05019_2.00 NN 70-40% CisBP GGTCGTAAAAC 55.9% identity Open · Scan
M09186_2.00 NN 70-40% CisBP ACATAAAT 55.9% identity Open · Scan
MA0878.1 NN 70-40% JASPAR GCAATAAAA 55.9% identity Open · Scan
MA0873.1 NN 70-40% JASPAR AGTCGTAAAAA 55.5% identity Open · Scan
M06238_2.00 NN 70-40% CisBP TCTTAATTAG 55.3% identity Open · Scan
M06323_2.00 NN 70-40% CisBP ATTAATTG 55.3% identity Open · Scan
MA0027.1 NN 70-40% JASPAR AAGTAGTGCCC 55.3% identity Open · Scan
MA0027.2 NN 70-40% JASPAR CTAATTAG 55.3% identity Open · Scan
M00464_2.00 NN 70-40% CisBP CTAATTACC 55.1% identity Open · Scan
M06504_2.00 NN 70-40% CisBP TTAAGTG 55.1% identity Open · Scan
MA0722.1 NN 70-40% JASPAR CTAATTAC 55.1% identity Open · Scan
MA0723.1 NN 70-40% JASPAR CTAATTAC 55.1% identity Open · Scan
M06264_2.00 NN 70-40% CisBP GCTAATTA 55.0% identity Open · Scan
M02211_2.00 NN 70-40% CisBP TTAATTAC 54.5% identity Open · Scan
M06224_2.00 NN 70-40% CisBP ATCATAAAA 54.3% identity Open · Scan
M00474_2.00 NN 70-40% CisBP TTTATGACC 53.7% identity Open · Scan
M00538_2.00 NN 70-40% CisBP TTTTATGACC 53.7% identity Open · Scan
MA0651.1 NN 70-40% JASPAR GGTCGTAAAAT 53.7% identity Open · Scan
MA0911.1 NN 70-40% JASPAR GGTCGTAAAATT 53.7% identity Open · Scan
M10805_2.00 NN 70-40% CisBP GGACAAATAGCCC 53.5% identity Open · Scan
M00508_2.00 NN 70-40% CisBP TTTTATGACC 53.4% identity Open · Scan
M02196_2.00 NN 70-40% CisBP TTAATTAC 53.4% identity Open · Scan
MA0906.1 NN 70-40% JASPAR GGTCGTAAAAA 53.4% identity Open · Scan
M03810_2.00 NN 70-40% CisBP GCTAAACGGT 52.3% identity Open · Scan
M09214_2.00 NN 70-40% CisBP GCATTAATCAA 51.9% identity Open · Scan
M01503_2.00 NN 70-40% CisBP TTAATTAC 51.8% identity Open · Scan
M06548_2.00 NN 70-40% CisBP TTAATTG 51.8% identity Open · Scan
MA0880.1 NN 70-40% JASPAR CCAATTAC 51.8% identity Open · Scan
MA0885.1 NN 70-40% JASPAR GCAATTAA 51.8% identity Open · Scan
M02107_2.00 NN 70-40% CisBP TTAATTGCT 51.7% identity Open · Scan
M06339_2.00 NN 70-40% CisBP TTTAATTGG 51.7% identity Open · Scan
M09181_2.00 NN 70-40% CisBP TTTAATTGTTTT 51.7% identity Open · Scan
MA0709.1 NN 70-40% JASPAR CCAATTAA 51.7% identity Open · Scan
MA0875.1 NN 70-40% JASPAR GCAATTAG 51.7% identity Open · Scan
MA0465.1 NN 70-40% JASPAR AAGCCATAAAA 51.2% identity Open · Scan
MA0912.2 NN 70-40% JASPAR CTAATTAC 50.4% identity Open · Scan
M00457_2.00 NN 70-40% CisBP TTAATTGCT 50.0% identity Open · Scan
M01245_2.00 NN 70-40% CisBP TTTTATTACC 50.0% identity Open · Scan
M02081_2.00 NN 70-40% CisBP TTTTATTA 50.0% identity Open · Scan
M03152_2.00 NN 70-40% CisBP TAATTAGCTAATTA 50.0% identity Open · Scan
M04906_2.00 NN 70-40% CisBP ATAACGAC 50.0% identity Open · Scan
M05003_2.00 NN 70-40% CisBP ATAACGAC 50.0% identity Open · Scan
M09195_2.00 NN 70-40% CisBP TAATTATAGGT 50.0% identity Open · Scan
M09676_2.00 NN 70-40% CisBP TTAATGA 50.0% identity Open · Scan
MA0122.1 NN 70-40% JASPAR TTAAGTGGA 50.0% identity Open · Scan
MA0122.2 NN 70-40% JASPAR ACCACTTAA 50.0% identity Open · Scan
MA0612.1 NN 70-40% JASPAR CCTAATTACC 50.0% identity Open · Scan
MA0650.1 NN 70-40% JASPAR CCAATAAAAA 50.0% identity Open · Scan
MA0666.1 NN 70-40% JASPAR CCAATTAG 50.0% identity Open · Scan
MA0708.1 NN 70-40% JASPAR CCAATTAA 50.0% identity Open · Scan
MA0724.1 NN 70-40% JASPAR ACCGATTAG 50.0% identity Open · Scan
MA0881.1 NN 70-40% JASPAR CCAATTAC 50.0% identity Open · Scan
MA0882.1 NN 70-40% JASPAR CCAATTAC 50.0% identity Open · Scan
MA0907.1 NN 70-40% JASPAR GCTCGTAAAAA 50.0% identity Open · Scan
MA0909.1 NN 70-40% JASPAR CCAATAAAAA 50.0% identity Open · Scan
MA1471.1 NN 70-40% JASPAR AAAAACCATTAC 50.0% identity Open · Scan
MA1476.1 NN 70-40% JASPAR GCAATTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 431 aa
184-246

Region 184-246 0 PWM

Residues
63 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJT
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 184-2461 model
Actions
Predicted = Low DIMER_B3KNJ7:184:246_5zjt_A_1 5zjt 184-246 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
190-245PF00046Homeodomainoverlaps 184-246
366-429PF13293Domain of unknown function (DUF4074)No overlap with loaded model regions