ModCRE DB

Transcription factor

B3KQB8

cDNA FLJ90160 fis, clone HEMBB1002661, highly similar to Hairy/enhancer-of-split related with YRPW motif 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 304 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0823.1 NN 70+% JASPAR GACACGTGCC 99.6% identity Open · Scan
Nearest Neighbor (70% - 40%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M03616_2.00 NN 70-40% CisBP GACACGTGTC 64.5% identity Open · Scan
M02790_2.00 NN 70-40% CisBP GGCACGTGTC 55.5% identity Open · Scan
MA0649.1 NN 70-40% JASPAR GACACGTGCC 54.0% identity Open · Scan
M01722_2.00 NN 70-40% CisBP GCACGTGTC 53.6% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 304 aa
50-104

Region 50-104 0 PWM

Residues
55 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 50-1041 model
Actions
Predicted = Low DIMER_B3KQB8:50:104_1hlo_A_1 1hlo 50-104 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
50-105PF00010Helix-loop-helix DNA-binding domainoverlaps 50-104
123-162PF07527Hairy OrangeNo overlap with loaded model regions