ModCRE DB

Transcription factor

B3KRH5

cDNA FLJ34267 fis, clone FEBRA2002707, highly similar to Zinc finger protein 585B

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 357 aa

159 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)155
MotifPredictionSourceDNA bindingSupportLogoActions
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 69.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 67.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 65.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 62.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.9% identity Open · Scan
M08301_2.00 NN 70-40% CisBP CTCCCATCC 61.5% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 61.4% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 61.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 60.9% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 60.7% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 60.2% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 60.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 60.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 59.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 59.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 59.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 59.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 58.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 58.8% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 58.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.7% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 58.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 57.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 57.6% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 57.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.5% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 57.4% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 57.3% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.3% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.1% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 57.1% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 56.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 56.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.4% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 56.4% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.3% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 56.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.9% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 55.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.7% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 55.7% identity Open · Scan
M00637_2.00 NN 70-40% CisBP CGCCCACG 55.5% identity Open · Scan
M04595_2.00 NN 70-40% CisBP GTTTCCGGTAAC 55.5% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 55.5% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 55.4% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 55.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 55.1% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 55.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.9% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 54.8% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 54.6% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.4% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 54.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.2% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 54.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 54.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.9% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.9% identity Open · Scan
M00021_2.00 NN 70-40% CisBP TACCCCACAC 53.8% identity Open · Scan
M00031_2.00 NN 70-40% CisBP TACCCCGCAC 53.8% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 53.8% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 53.8% identity Open · Scan
MA0735.1 NN 70-40% JASPAR AGACCCCCCACGAAGC 53.8% identity Open · Scan
MA0737.1 NN 70-40% JASPAR GACCCCCCACGAAG 53.8% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 53.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.6% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.6% identity Open · Scan
M06050_2.00 NN 70-40% CisBP CACCTGT 53.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 53.3% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 53.3% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 53.3% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 53.3% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 53.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.2% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 53.2% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.1% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 53.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 53.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.9% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 52.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.4% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.3% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.3% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.3% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 52.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.9% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 51.8% identity Open · Scan
M01022_2.00 NN 70-40% CisBP GGACCACCCAC 51.8% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 51.8% identity Open · Scan
M04651_2.00 NN 70-40% CisBP TTCACTATTATAGTGAA 51.8% identity Open · Scan
M06039_2.00 NN 70-40% CisBP TATCTGAAA 51.8% identity Open · Scan
M08248_2.00 NN 70-40% CisBP ATTTTTTGTCCGCCGACATTAAAG 51.8% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 51.8% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 51.8% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 51.8% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 51.8% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 51.8% identity Open · Scan
MA0696.1 NN 70-40% JASPAR GACCCCCCGCTGTG 51.8% identity Open · Scan
MA0732.1 NN 70-40% JASPAR CTACGCCCACGCACT 51.8% identity Open · Scan
MA0733.1 NN 70-40% JASPAR TTACGCCCACGCATTT 51.8% identity Open · Scan
MA0734.1 NN 70-40% JASPAR GCGACCACACTG 51.8% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 51.8% identity Open · Scan
MA1628.1 NN 70-40% JASPAR CACAGCAGGGG 51.8% identity Open · Scan
MA1650.1 NN 70-40% JASPAR CCCCGCGCACCC 51.8% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 51.7% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 51.6% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.6% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.5% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.5% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 51.5% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 51.4% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.2% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.1% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 51.1% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 51.1% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.9% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.8% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 50.5% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.2% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.1% identity Open · Scan
M01447_2.00 NN 70-40% CisBP TACCCCTGA 50.0% identity Open · Scan
M01537_2.00 NN 70-40% CisBP TACCCCGCAC 50.0% identity Open · Scan
M01540_2.00 NN 70-40% CisBP CTCCCCC 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M02643_2.00 NN 70-40% CisBP GACCACCCACG 50.0% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 50.0% identity Open · Scan
MA1653.1 NN 70-40% JASPAR CCCCCCTCCCCC 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B3KRH5_B3KRH5_HUMAN:175:328_2i13_A_1 ModCRE Homology model ATTCACGAGCTGCAGCTCCAC Region 175-328 · 1 3D model Open · Scan
TFS_tr_B3KRH5_B3KRH5_HUMAN:25:301_5v3j_E_1 ModCRE Homology model TCACACTCCGTCCCTCCGGCCCGGCG Region 25-301 · 1 3D model Open · Scan
TFS_tr_B3KRH5_B3KRH5_HUMAN:25:301_5v3m_C_1 ModCRE Homology model CGCACCCCCCCACCCCCCCCCCCCCC Region 25-301 · 1 3D model Open · Scan
TFS_tr_B3KRH5_B3KRH5_HUMAN:51:329_5wjq_D_1 ModCRE Homology model CCGACACGCCCCACCCCCCCCTTTTCCC Region 51-329 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 357 aa
25-329

Region 25-329 4 PWM

Residues
305 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 25-3296 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B3KRH5_B3KRH5_HUMAN:248:299_1llm_D_1 1llm 248-299 View model · PDB
Predicted = Low TFS_tr_B3KRH5_B3KRH5_HUMAN:175:328_2i13_A_1 2i13 175-328 View model · PDB
Predicted = Low TFS_tr_B3KRH5_B3KRH5_HUMAN:25:301_5v3j_E_1 5v3j 25-301 View model · PDB
Predicted = Low TFS_tr_B3KRH5_B3KRH5_HUMAN:25:301_5v3m_C_1 5v3m 25-301 View model · PDB
Predicted = Low TFS_tr_B3KRH5_B3KRH5_HUMAN:26:324_7w1m_H_1 7w1m 26-324 View model · PDB
Predicted = Low TFS_tr_B3KRH5_B3KRH5_HUMAN:51:329_5wjq_D_1 5wjq 51-329 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 23:356 175 328 P:A · DNA:C,D 61.0% / 70.8% 100 View · PDB TFS_tr_B3KRH5_B3KRH5_HUMAN:175:328_2i13_A_1
1 5wjq 23:356 51 329 P:D · DNA:A,B 53.0% / 69.9% 99 View · PDB TFS_tr_B3KRH5_B3KRH5_HUMAN:51:329_5wjq_D_1
2 5v3m 23:356 25 301 P:C · DNA:A,B 52.3% / 70.0% 100 View · PDB TFS_tr_B3KRH5_B3KRH5_HUMAN:25:301_5v3m_C_1
3 5v3j 23:356 25 301 P:E · DNA:A,B 52.3% / 70.0% 100 View · PDB TFS_tr_B3KRH5_B3KRH5_HUMAN:25:301_5v3j_E_1
1 1llm 23:356 248,248 299,299 P:C,D · DNA:A,B 40.4% / 57.7% 59,61 View · PDB DIMER_tr_B3KRH5_B3KRH5_HUMAN:248:299_1llm_D_1
5 7w1m 23:356 26 324 P:H · DNA:F,G 36.0% / 51.0% 92 View · PDB TFS_tr_B3KRH5_B3KRH5_HUMAN:26:324_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
26-48PF00096Zinc finger, C2H2 typeoverlaps 25-329
54-76PF00096Zinc finger, C2H2 typeoverlaps 25-329
82-104PF00096Zinc finger, C2H2 typeoverlaps 25-329
110-132PF00096Zinc finger, C2H2 typeoverlaps 25-329
138-160PF00096Zinc finger, C2H2 typeoverlaps 25-329
166-188PF00096Zinc finger, C2H2 typeoverlaps 25-329
194-213PF00096Zinc finger, C2H2 typeoverlaps 25-329
222-244PF00096Zinc finger, C2H2 typeoverlaps 25-329
250-272PF00096Zinc finger, C2H2 typeoverlaps 25-329
278-300PF00096Zinc finger, C2H2 typeoverlaps 25-329
306-328PF00096Zinc finger, C2H2 typeoverlaps 25-329
334-356PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions