ModCRE DB

Transcription factor

B3KSN8 - ZNF333

Zinc finger protein 333, isoform CRA_a (cDNA FLJ36709 fis, clone UTERU2009951, highly similar to Zinc finger protein 333)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 556 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07607_2.00 Known CisBP GGCTCCACG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 556 aa
254-531

Region 254-531 0 PWM

Residues
278 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 254-5311 model
Actions
Predicted = Low TFS_B3KSN8:254:531_5wjq_D_1 5wjq 254-531 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
93-133PF01352KRAB boxNo overlap with loaded model regions
257-279PF00096Zinc finger, C2H2 typeoverlaps 254-531
299-324PF13465Zinc-finger double domainoverlaps 254-531
341-363PF00096Zinc finger, C2H2 typeoverlaps 254-531
369-391PF00096Zinc finger, C2H2 typeoverlaps 254-531
397-419PF00096Zinc finger, C2H2 typeoverlaps 254-531
425-447PF00096Zinc finger, C2H2 typeoverlaps 254-531
453-475PF00096Zinc finger, C2H2 typeoverlaps 254-531
481-503PF00096Zinc finger, C2H2 typeoverlaps 254-531
509-531PF00096Zinc finger, C2H2 typeoverlaps 254-531