ModCRE DB

Transcription factor

B3KTG1

cDNA FLJ38185 fis, clone FCBBF1000171, highly similar to Homo sapiens zinc finger protein 415 (ZNF415), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 603 aa

117 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M08252_2.00 NN 70+% CisBP CCGGCTCCAGCACCC 98.8% identity Open · Scan
M00960_2.00 NN 70+% CisBP TGCATCCC 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)115
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 69.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 68.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 68.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 68.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 67.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 67.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 67.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 60.3% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 59.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 59.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 59.2% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 58.8% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 58.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 58.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 58.5% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 58.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 58.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 57.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.8% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 57.7% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 57.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 57.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.4% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 57.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.3% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 57.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 56.9% identity Open · Scan
MA1463.1 NN 70-40% JASPAR TCTAATTAAA 56.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.5% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 56.4% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 56.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.0% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 55.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.6% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.6% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 55.5% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 55.4% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 55.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.1% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 55.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.9% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 54.9% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 54.8% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 54.6% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 54.4% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 54.4% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 54.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.1% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.8% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.8% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.7% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 53.7% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 53.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.6% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 53.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 53.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.1% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.0% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 52.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 52.8% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.8% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.6% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.2% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 52.2% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 52.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.9% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 51.9% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 51.6% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 51.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 51.3% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 51.3% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 51.0% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.7% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 50.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 50.6% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.6% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.6% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.5% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.2% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.0% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 50.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 603 aa
292-452

Region 292-452 0 PWM

Residues
161 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 292-4521 model
Actions
Predicted = Low TFS_B3KTG1:292:452_5t0u_A_1 5t0u 292-452 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
292-314PF00096Zinc finger, C2H2 typeoverlaps 292-452
320-342PF00096Zinc finger, C2H2 typeoverlaps 292-452
348-370PF00096Zinc finger, C2H2 typeoverlaps 292-452
376-398PF00096Zinc finger, C2H2 typeoverlaps 292-452
404-426PF00096Zinc finger, C2H2 typeoverlaps 292-452
432-454PF00096Zinc finger, C2H2 typeoverlaps 292-452
460-482PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
488-510PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
516-538PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
544-566PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
572-594PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions