ModCRE DB

Transcription factor

B3KTM5

cDNA FLJ38493 fis, clone FEHRT2000364, highly similar to Zinc finger protein 587

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 532 aa

58 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07746_2.00 NN 70+% CisBP CAGCTGGCGCCCAACATGGGTCCC 99.4% identity Open · Scan
Nearest Neighbor (70% - 40%)57
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 63.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 59.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 57.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 56.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 56.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.3% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 56.2% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 55.8% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 55.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 55.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 54.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.8% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 53.7% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 53.6% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 53.6% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.6% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 53.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.7% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 52.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 52.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 52.0% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 51.9% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 51.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.1% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 51.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 51.0% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.7% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 50.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 50.6% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.4% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 50.1% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.0% identity Open · Scan
MA0695.1 NN 70-40% JASPAR GCGACCACCGAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 532 aa
197-472

Region 197-472 0 PWM

Residues
276 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 197-4721 model
Actions
Predicted = Low TFS_B3KTM5:197:472_5wjq_D_1 5wjq 197-472 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
197-219PF00096Zinc finger, C2H2 typeoverlaps 197-472
225-247PF00096Zinc finger, C2H2 typeoverlaps 197-472
253-275PF00096Zinc finger, C2H2 typeoverlaps 197-472
309-331PF00096Zinc finger, C2H2 typeoverlaps 197-472
337-359PF00096Zinc finger, C2H2 typeoverlaps 197-472
365-387PF00096Zinc finger, C2H2 typeoverlaps 197-472
393-415PF00096Zinc finger, C2H2 typeoverlaps 197-472
421-443PF00096Zinc finger, C2H2 typeoverlaps 197-472
449-471PF00096Zinc finger, C2H2 typeoverlaps 197-472
477-499PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
505-527PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions