ModCRE DB

Transcription factor

B3KU46

Zinc finger protein 34

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 519 aa

110 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08371_2.00 NN 70+% CisBP CCAGACTTGTCCTCT 99.7% identity Open · Scan
Nearest Neighbor (70% - 40%)109
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 68.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 67.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 65.4% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 64.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 64.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 61.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 60.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 59.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 59.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 59.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 58.8% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 58.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.8% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 57.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 57.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 57.1% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.9% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 56.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.8% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 56.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.6% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 56.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.7% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.6% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.6% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 55.5% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 55.2% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.0% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 55.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 55.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 54.9% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 54.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 54.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 54.6% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 54.5% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 54.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.1% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 54.0% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 54.0% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 53.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.7% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 53.4% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 53.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.1% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 53.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.0% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 53.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 52.9% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 52.7% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.7% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 52.6% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 52.6% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 52.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 52.1% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 52.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 51.9% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.9% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.9% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 51.9% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.8% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 51.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.6% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.6% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 51.5% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.4% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.9% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 50.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.7% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.3% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 50.3% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.2% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.1% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 50.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.0% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 50.0% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 50.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 50.0% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 50.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 50.0% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 519 aa
210-485

Region 210-485 0 PWM

Residues
276 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 210-4851 model
Actions
Predicted = Low TFS_B3KU46:210:485_5v3j_E_1 5v3j 210-485 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
154-176PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
210-232PF00096Zinc finger, C2H2 typeoverlaps 210-485
238-260PF00096Zinc finger, C2H2 typeoverlaps 210-485
266-288PF00096Zinc finger, C2H2 typeoverlaps 210-485
294-316PF00096Zinc finger, C2H2 typeoverlaps 210-485
322-344PF00096Zinc finger, C2H2 typeoverlaps 210-485
350-372PF00096Zinc finger, C2H2 typeoverlaps 210-485
378-400PF00096Zinc finger, C2H2 typeoverlaps 210-485
406-428PF00096Zinc finger, C2H2 typeoverlaps 210-485
434-456PF00096Zinc finger, C2H2 typeoverlaps 210-485
462-484PF00096Zinc finger, C2H2 typeoverlaps 210-485
490-512PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions