Transcription factor

B3KU97

cDNA FLJ39436 fis, clone PROST2004739, highly similar to Zinc finger protein 341

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 706 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA1655.1	NN 70+%	JASPAR	GGGAACAGCCAC	98.8% identity		Open · Scan

Nearest Neighbor (70% - 40%)12

Motif	Prediction	Source	DNA binding	Support	Actions
M03691_2.00	NN 70-40%	CisBP	ATGCAACAGGTGG	57.1% identity	Open · Scan
M08979_2.00	NN 70-40%	CisBP	CCCACCCTCC	57.1% identity	Open · Scan
M06087_2.00	NN 70-40%	CisBP	ACCACCTGTTGCA	56.8% identity	Open · Scan
M08397_2.00	NN 70-40%	CisBP	ATGCAACAGGTG	56.6% identity	Open · Scan
MA0743.1	NN 70-40%	JASPAR	GAGCAACAGGTGGTT	56.6% identity	Open · Scan
MA0744.1	NN 70-40%	JASPAR	ATGCAACAGGTGG	56.6% identity	Open · Scan
M09002_2.00	NN 70-40%	CisBP	CCACCTGG	55.1% identity	Open · Scan
MA1558.1	NN 70-40%	JASPAR	GGCAGGTGCA	55.1% identity	Open · Scan
M03711_2.00	NN 70-40%	CisBP	TTTTTTTTGCATTTTTT	51.9% identity	Open · Scan
M01042_2.00	NN 70-40%	CisBP	TGGGACCTGA	51.1% identity	Open · Scan
M01538_2.00	NN 70-40%	CisBP	GCCCCTGA	51.1% identity	Open · Scan
M06135_2.00	NN 70-40%	CisBP	CAGCCACGCCCACCT	51.0% identity	Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 706 aa

294-582

Residues: 289 aa
Domains: PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models: 1 active PDB
Templates: 5WJQ
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 294-5821 model

				Actions
Predicted = Low	TFS_B3KU97:294:582_5wjq_D_1	5wjq	294-582	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
175-196	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
202-224	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
355-377	PF13912	C2H2-type zinc finger	overlaps 294-582
474-496	PF00096	Zinc finger, C2H2 type	overlaps 294-582
502-529	PF00096	Zinc finger, C2H2 type	overlaps 294-582
535-557	PF00096	Zinc finger, C2H2 type	overlaps 294-582