Region 56-112 0 PWM
- Residues
- 57 aa
- Domains
- PF00320 · GATA zinc finger
- 3D models
- 1 active PDB
- Templates
- 3DFX
- Sources
- Structure model
Transcription factor
B3KUF4
cDNA FLJ39741 fis, clone SMINT2016544, highly similar to TRANSCRIPTION FACTOR GATA-4
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 236 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
236 aa
56-112
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 56-1121 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_B3KUF4:56:112_3dfx_A_1 | 3dfx | 56-112 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 11-43 | PF00320 | GATA zinc finger | No overlap with loaded model regions |
| 65-98 | PF00320 | GATA zinc finger | overlaps 56-112 |