ModCRE DB

Transcription factor

B3KUL8

cDNA FLJ40195 fis, clone TESTI2019787, highly similar to T-box transcription factor TBX22

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 400 aa

16 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M05798_2.00 NN 70+% CisBP AAAGGTGTGAAA 72.6% identity Open · Scan
Nearest Neighbor (70% - 40%)15
MotifPredictionSourceDNA bindingSupportLogoActions
MA1565.1 NN 70-40% JASPAR GGAGGTGTGAAA 62.7% identity Open · Scan
M03554_2.00 NN 70-40% CisBP AGGTGTGAAATTCACACCT 62.1% identity Open · Scan
MA0803.1 NN 70-40% JASPAR AGGTGTGA 62.1% identity Open · Scan
M09650_2.00 NN 70-40% CisBP CCTGTCAACACC 57.2% identity Open · Scan
MA0689.1 NN 70-40% JASPAR TAGGTGTGAAG 57.2% identity Open · Scan
M05822_2.00 NN 70-40% CisBP GGAGGTGTGAAT 55.8% identity Open · Scan
MA0805.1 NN 70-40% JASPAR AGGTGTGA 55.8% identity Open · Scan
M03988_2.00 NN 70-40% CisBP AGGTGTGAA 53.5% identity Open · Scan
M03994_2.00 NN 70-40% CisBP AAGGTGTGAA 53.1% identity Open · Scan
M01029_2.00 NN 70-40% CisBP AGGTGTGA 50.9% identity Open · Scan
M03993_2.00 NN 70-40% CisBP GAGGTGTGAA 50.5% identity Open · Scan
MA1567.1 NN 70-40% JASPAR GAGGTGTGAA 50.2% identity Open · Scan
M01030_2.00 NN 70-40% CisBP TTGACACCTC 50.0% identity Open · Scan
M03559_2.00 NN 70-40% CisBP AGGTGTGAAATTTCACACCT 50.0% identity Open · Scan
MA0806.1 NN 70-40% JASPAR AGGTGTGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 400 aa
1-162

Region 1-162 0 PWM

Residues
162 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
4S0H
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-1621 model
Actions
Predicted = Low DIMER_B3KUL8:1:162_4s0h_E_1 4s0h 1-162 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-163PF00907T-boxoverlaps 1-162