ModCRE DB

Transcription factor

B3KUX2

cDNA FLJ40845 fis, clone TRACH2014483, highly similar to Zinc finger protein 682

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 466 aa

91 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA1599.1 NN 70+% JASPAR CGGGCCAAGCCCCTAT 99.7% identity Open · Scan
M00955_2.00 NN 70+% CisBP ACGTCCTCT 72.9% identity Open · Scan
Nearest Neighbor (70% - 40%)89
MotifPredictionSourceDNA bindingSupportLogoActions
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 63.6% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 62.8% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 62.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 61.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 61.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 60.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 60.4% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 60.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 60.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 59.7% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 59.0% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 58.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 58.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.6% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 58.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 57.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 57.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 57.6% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.6% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.2% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 56.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 56.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 55.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.4% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 54.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 54.3% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 54.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 53.8% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 53.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.4% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 53.3% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 53.1% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.5% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.3% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 52.1% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.8% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 51.8% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 51.8% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 51.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 51.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 51.7% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 51.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 51.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.2% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 51.1% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 51.1% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 51.1% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 51.1% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 51.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 50.8% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.7% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.6% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.4% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.1% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 50.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.0% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 50.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 466 aa
137-416

Region 137-416 0 PWM

Residues
280 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 137-4161 model
Actions
Predicted = Low TFS_B3KUX2:137:416_5wjq_D_1 5wjq 137-416 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
141-163PF00096Zinc finger, C2H2 typeoverlaps 137-416
170-191PF00096Zinc finger, C2H2 typeoverlaps 137-416
197-219PF00096Zinc finger, C2H2 typeoverlaps 137-416
253-275PF00096Zinc finger, C2H2 typeoverlaps 137-416
281-303PF00096Zinc finger, C2H2 typeoverlaps 137-416
309-331PF00096Zinc finger, C2H2 typeoverlaps 137-416
337-359PF00096Zinc finger, C2H2 typeoverlaps 137-416
393-415PF00096Zinc finger, C2H2 typeoverlaps 137-416
421-441PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions