ModCRE DB

Transcription factor

B3KV39

cDNA FLJ16099 fis, clone TESTI2008278, highly similar to Homo sapiens forkhead box K1 (FOXK1), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 488 aa

38 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0852.2 NN 70+% JASPAR AATGTAAACAAGGC 98.1% identity Open · Scan
MA0852.1 NN 70+% JASPAR AAAATGTAAACAAACAG 88.5% identity Open · Scan
Nearest Neighbor (70% - 40%)36
MotifPredictionSourceDNA bindingSupportLogoActions
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 60.5% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 59.2% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 59.2% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 59.0% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 57.6% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 57.6% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 55.6% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 55.6% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 55.6% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 55.0% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 54.7% identity Open · Scan
M03034_2.00 NN 70-40% CisBP GTAAACA 54.5% identity Open · Scan
M01990_2.00 NN 70-40% CisBP TTGTTTACA 54.3% identity Open · Scan
M01991_2.00 NN 70-40% CisBP ATTGTAAACAAA 54.3% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 54.0% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 53.7% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 53.7% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 53.6% identity Open · Scan
M09104_2.00 NN 70-40% CisBP CCTTGTTTACTTT 53.5% identity Open · Scan
M01982_2.00 NN 70-40% CisBP TATGTAAACA 53.4% identity Open · Scan
MA0032.1 NN 70-40% JASPAR GGTAAGTA 53.4% identity Open · Scan
M01014_2.00 NN 70-40% CisBP GCGCACAAA 53.2% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 53.1% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 53.0% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 53.0% identity Open · Scan
MA0846.1 NN 70-40% JASPAR TAAGTAAACAAA 52.4% identity Open · Scan
M00045_2.00 NN 70-40% CisBP GTAAACAA 52.2% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 52.0% identity Open · Scan
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 52.0% identity Open · Scan
M01003_2.00 NN 70-40% CisBP GTAAACAA 51.0% identity Open · Scan
M10565_2.00 NN 70-40% CisBP AAACAAACAATC 51.0% identity Open · Scan
MA0041.1 NN 70-40% JASPAR GAATGTTTGTTT 51.0% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 50.9% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 50.9% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 50.0% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 488 aa
69-146

Region 69-146 0 PWM

Residues
78 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
3QRF
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 69-1461 model
Actions
Predicted = Low DIMER_B3KV39:69:146_3qrf_G_1 3qrf 69-146 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
68-152PF00250Forkhead domainoverlaps 69-146