ModCRE DB

Transcription factor

B3KV76

cDNA FLJ16219 fis, clone CTONG3002433, highly similar to Zinc finger protein 70

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 446 aa

119 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 74.6% identity Open · Scan
M00939_2.00 NN 70+% CisBP CCACCTCA 71.0% identity Open · Scan
Nearest Neighbor (70% - 40%)117
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 67.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 64.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 64.3% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 63.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 62.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 61.7% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 61.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 61.4% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 61.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 61.1% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 60.8% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 60.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 60.6% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 60.5% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 60.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 60.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 59.9% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 59.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.5% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 59.4% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 58.8% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 58.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 58.6% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 58.5% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.3% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 58.3% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 58.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.2% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 58.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 57.9% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 57.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 57.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 57.4% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 56.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 56.6% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 56.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.3% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 56.3% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 56.3% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 56.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.9% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 55.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.3% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.1% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 55.0% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 54.8% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.4% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.1% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 53.9% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.9% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.6% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 53.1% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 53.1% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 53.0% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 52.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 52.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 52.8% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.7% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 52.6% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.4% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 52.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.4% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.2% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 52.1% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 52.1% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 52.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.0% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 52.0% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 52.0% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 52.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.9% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 51.8% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.8% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 51.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.1% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 50.0% identity Open · Scan
M01439_2.00 NN 70-40% CisBP TTACGCCACA 50.0% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 446 aa
138-247

Region 138-247 0 PWM

Residues
110 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 138-2471 model
Actions
Predicted = Low TFS_B3KV76:138:247_5egb_A_1 5egb 138-247 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
140-162PF00096Zinc finger, C2H2 typeoverlaps 138-247
168-190PF00096Zinc finger, C2H2 typeoverlaps 138-247
196-218PF00096Zinc finger, C2H2 typeoverlaps 138-247
238-263PF13465Zinc-finger double domainoverlaps 138-247
294-319PF13465Zinc-finger double domainNo overlap with loaded model regions
336-358PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
364-386PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
395-413PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
419-441PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions