ModCRE DB

Transcription factor

B3KVA4

Transcription factor 4

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 667 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA0830.1 NN 70+% JASPAR CGCACCTGCT 99.8% identity Open · Scan
M04215_2.00 NN 70+% CisBP GCACCTGC 99.2% identity Open · Scan
M08775_2.00 NN 70+% CisBP TGCACCTGG 97.9% identity Open · Scan
Nearest Neighbor (70% - 40%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA1648.1 NN 70-40% JASPAR CGCACCTGCCG 63.2% identity Open · Scan
M07806_2.00 NN 70-40% CisBP ACACCTGG 60.4% identity Open · Scan
MA0521.1 NN 70-40% JASPAR AACAGCTGCAG 60.4% identity Open · Scan
MA0091.1 NN 70-40% JASPAR CGACCATCTGTT 52.1% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 667 aa
556-627

Region 556-627 0 PWM

Residues
72 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 556-6271 model
Actions
Predicted = Low DIMER_B3KVA4:556:627_2ypb_B_1 2ypb 556-627 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
565-618PF00010Helix-loop-helix DNA-binding domainoverlaps 556-627