ModCRE DB

Transcription factor

B3KVM5

cDNA FLJ16751 fis, clone BEAST2001444, highly similar to Orphan nuclear receptor PXR

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 322 aa

1 Generated PWM

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M09283_2.00 Known CisBP TGAGGTCAAAAAAGTTCAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

PWM available; no validated DNA-bound structure

Exact accession contains only 9.09% of the canonical nuclear-receptor DNA-binding domain. Pfam instead detects the nuclear-receptor ligand-binding domain (PF00104), so the expected DBD is absent.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomain
130-299PF00104Ligand-binding domain of nuclear hormone receptor