Region 21-218 2 PWM
- Residues
- 198 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 7XUR, 7ZWC, 7ZXE, 8ITY
- Sources
- Predicted = Low
Transcription factor
B4DDR9
snRNA-activating protein complex subunit 3 (Small nuclear RNA-activating complex polypeptide 3)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 218 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_B4DDR9_B4DDR9_HUMAN:21:218_8ity_3_1 | ModCRE | Homology model | CCCCCCGGTATTAG | Region 21-218 · 1 3D model | Open · Scan | |
| TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7xur_B_1 | ModCRE | Homology model | AAGGACCGGCCCGGT | Region 28-218 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
218 aa
21-218
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models
4 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 21-2184 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_B4DDR9_B4DDR9_HUMAN:21:218_8ity_3_1 | 8ity | 21-218 | View model · PDB |
| Predicted = Low | TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7xur_B_1 | 7xur | 28-218 | View model · PDB |
| Predicted = Low | TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7zwc_b_1 | 7zwc | 28-218 | View model · PDB |
| Predicted = Low | TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7zxe_b_1 | 7zxe | 28-218 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 8ity | 21:218 | 21 | 218 | P:3 · DNA:X,Y | 82.4% / 83.3% | 50 | View · PDB TFS_tr_B4DDR9_B4DDR9_HUMAN:21:218_8ity_3_1 |
| 2 | 7xur | 21:218 | 28 | 218 | P:B · DNA:X,Y | 80.5% / 81.4% | 49 | View · PDB TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7xur_B_1 |
| 3 | 7zxe | 21:218 | 28 | 218 | P:b · DNA:N,T | 80.5% / 81.4% | 49 | View · PDB TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7zxe_b_1 |
| 4 | 7zwc | 21:218 | 28 | 218 | P:b · DNA:N,T | 80.5% / 81.4% | 49 | View · PDB TFS_tr_B4DDR9_B4DDR9_HUMAN:28:218_7zwc_b_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.