ModCRE DB

Transcription factor

B4DF20

cDNA FLJ58172, highly similar to Zinc finger protein 238

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 487 aa

21 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M02917_2.00 NN 70+% CisBP GAACATCTGGATG 98.1% identity Open · Scan
MA0698.1 NN 70+% JASPAR CATCCAGATGTTC 98.0% identity Open · Scan
Nearest Neighbor (70% - 40%)19
MotifPredictionSourceDNA bindingSupportLogoActions
M00135_2.00 NN 70-40% CisBP AGCCCCCCAA 59.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.5% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 58.3% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 57.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.7% identity Open · Scan
M07674_2.00 NN 70-40% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 54.3% identity Open · Scan
MA0029.1 NN 70-40% JASPAR AAGATAAGATAACA 53.3% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 53.1% identity Open · Scan
MA0146.1 NN 70-40% JASPAR GGGGCCGAGGCCTG 53.1% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 52.7% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.1% identity Open · Scan
MA1548.1 NN 70-40% JASPAR TGGGCCCCCT 51.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.2% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 51.1% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.0% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 50.0% identity Open · Scan
M08528_2.00 NN 70-40% CisBP ACCCCACTTTTTTG 50.0% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 487 aa
414-462

Region 414-462 0 PWM

Residues
49 aa
Domains
PF13894 · C2H2-type zinc finger
3D models
1 active PDB
Templates
2KMK
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 414-4621 model
Actions
Predicted = Low TFS_B4DF20:414:462_2kmk_A_1 2kmk 414-462 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
23-129PF00651BTB/POZ domainNo overlap with loaded model regions
379-401PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
420-441PF13894C2H2-type zinc fingeroverlaps 414-462