ModCRE DB

Transcription factor

B4DFC8

cDNA FLJ58795, highly similar to Zinc finger protein 606

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 702 aa

125 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)121
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 68.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 67.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 60.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 59.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.2% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 58.6% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 57.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.8% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.5% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 57.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.9% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 56.7% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 56.6% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 56.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.3% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 56.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 56.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 56.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.7% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 55.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 55.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.9% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.9% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 54.6% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 54.3% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 54.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.1% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 53.9% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.8% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.7% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 53.7% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.6% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 53.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.5% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.4% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.3% identity Open · Scan
M06084_2.00 NN 70-40% CisBP AGACCACCCAC 53.1% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 53.1% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 52.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.8% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 52.8% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.8% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 52.8% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 52.7% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.7% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.1% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.7% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 51.6% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 51.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.4% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 51.4% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.3% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.3% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 51.3% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 51.2% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 51.2% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.2% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 51.2% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 51.2% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 50.8% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.7% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.7% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.6% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.5% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.4% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.3% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 50.2% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 50.1% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.1% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 50.1% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.1% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 50.1% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 50.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 50.0% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 50.0% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 50.0% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 50.0% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 50.0% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B4DFC8_B4DFC8_HUMAN:306:585_5wjq_D_1 ModCRE Homology model GGGTCCCCACCCGGCCCCCCCCCTCCAC Region 306-585 · 1 3D model Open · Scan
TFS_tr_B4DFC8_B4DFC8_HUMAN:365:641_5v3j_E_1 ModCRE Homology model CTGGAGGGCCCCTTCCCCTCTGGGAA Region 365-641 · 1 3D model Open · Scan
TFS_tr_B4DFC8_B4DFC8_HUMAN:365:641_5v3m_C_1 ModCRE Homology model GGGACACCCCCCGCCCCCCCGGCCCC Region 365-641 · 1 3D model Open · Scan
TFS_tr_B4DFC8_B4DFC8_HUMAN:487:640_2i13_A_1 ModCRE Homology model ACTTAGAGAGAAGTTCTACCA Region 487-640 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 702 aa
306-641

Region 306-641 4 PWM

Residues
336 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 306-6416 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B4DFC8_B4DFC8_HUMAN:531:583_1llm_D_1 1llm 531-583 View model · PDB
Predicted = Low TFS_tr_B4DFC8_B4DFC8_HUMAN:306:585_5wjq_D_1 5wjq 306-585 View model · PDB
Predicted = Low TFS_tr_B4DFC8_B4DFC8_HUMAN:338:639_7w1m_H_1 7w1m 338-639 View model · PDB
Predicted = Low TFS_tr_B4DFC8_B4DFC8_HUMAN:365:641_5v3j_E_1 5v3j 365-641 View model · PDB
Predicted = Low TFS_tr_B4DFC8_B4DFC8_HUMAN:365:641_5v3m_C_1 5v3m 365-641 View model · PDB
Predicted = Low TFS_tr_B4DFC8_B4DFC8_HUMAN:487:640_2i13_A_1 2i13 487-640 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 305:699 487 640 P:A · DNA:C,D 61.0% / 74.0% 100 View · PDB TFS_tr_B4DFC8_B4DFC8_HUMAN:487:640_2i13_A_1
1 5wjq 305:699 306 585 P:D · DNA:A,B 52.1% / 68.9% 99 View · PDB TFS_tr_B4DFC8_B4DFC8_HUMAN:306:585_5wjq_D_1
2 5v3m 305:699 365 641 P:C · DNA:A,B 51.3% / 68.6% 100 View · PDB TFS_tr_B4DFC8_B4DFC8_HUMAN:365:641_5v3m_C_1
3 5v3j 305:699 365 641 P:E · DNA:A,B 51.3% / 68.6% 100 View · PDB TFS_tr_B4DFC8_B4DFC8_HUMAN:365:641_5v3j_E_1
1 1llm 305:699 531,531 583,583 P:C,D · DNA:A,B 45.3% / 66.0% 60,62 View · PDB DIMER_tr_B4DFC8_B4DFC8_HUMAN:531:583_1llm_D_1
5 7w1m 305:699 338 639 P:H · DNA:F,G 34.7% / 53.7% 93 View · PDB TFS_tr_B4DFC8_B4DFC8_HUMAN:338:639_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
338-360PF00096Zinc finger, C2H2 typeoverlaps 306-641
366-388PF00096Zinc finger, C2H2 typeoverlaps 306-641
394-416PF00096Zinc finger, C2H2 typeoverlaps 306-641
422-444PF00096Zinc finger, C2H2 typeoverlaps 306-641
450-472PF00096Zinc finger, C2H2 typeoverlaps 306-641
478-500PF00096Zinc finger, C2H2 typeoverlaps 306-641
506-528PF00096Zinc finger, C2H2 typeoverlaps 306-641
534-556PF00096Zinc finger, C2H2 typeoverlaps 306-641
562-584PF00096Zinc finger, C2H2 typeoverlaps 306-641
590-612PF00096Zinc finger, C2H2 typeoverlaps 306-641
618-640PF00096Zinc finger, C2H2 typeoverlaps 306-641
646-668PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
674-696PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions