ModCRE DB

Transcription factor

B4DFT8

Zinc finger protein 438

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 547 aa

5 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml2_A_1 ModCRE Homology model CAACGTGTTGGAAAA Region 228-287 · 1 3D model Open · Scan
TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml3_A_1 ModCRE Homology model TGGCCGGGGGGGGCC Region 228-287 · 1 3D model Open · Scan
TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml4_A_1 ModCRE Homology model CTAGGTTTCAAAAGAA Region 228-287 · 1 3D model Open · Scan
TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml6_A_1 ModCRE Homology model CTCGGTCGCGAAAAA Region 228-287 · 1 3D model Open · Scan
TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml7_A_1 ModCRE Homology model CTAGGACACAGAAAAA Region 228-287 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 547 aa
227-287

Region 227-287 5 PWM

Residues
61 aa
Domains
PF13894 · C2H2-type zinc finger
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 6ML2, 6ML3, 6ML4, 6ML6, 6ML7
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 227-2876 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B4DFT8_B4DFT8_HUMAN:227:277_1llm_C_1 1llm 227-277 View model · PDB
Predicted = Low TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml2_A_1 6ml2 228-287 View model · PDB
Predicted = Low TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml3_A_1 6ml3 228-287 View model · PDB
Predicted = Low TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml4_A_1 6ml4 228-287 View model · PDB
Predicted = Low TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml6_A_1 6ml6 228-287 View model · PDB
Predicted = Low TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml7_A_1 6ml7 228-287 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ml3 200:312 228 287 P:A · DNA:E,F 36.7% / 55.0% 53 View · PDB TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml3_A_1
2 6ml7 200:312 228 287 P:A · DNA:E,F 36.7% / 55.0% 41 View · PDB TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml7_A_1
3 6ml6 200:312 228 287 P:A · DNA:E,F 36.7% / 55.0% 41 View · PDB TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml6_A_1
4 6ml4 200:312 228 287 P:A · DNA:E,F 36.7% / 55.0% 41 View · PDB TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml4_A_1
5 6ml2 200:312 228 287 P:A · DNA:E,F 36.7% / 55.0% 43 View · PDB TFS_tr_B4DFT8_B4DFT8_HUMAN:228:287_6ml2_A_1
1 1llm 200:312 227,227 277,277 P:C,D · DNA:A,B 31.4% / 51.0% 58,60 View · PDB DIMER_tr_B4DFT8_B4DFT8_HUMAN:227:277_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
254-277PF13894C2H2-type zinc fingeroverlaps 227-287