Region 164-195 0 PWM
- Residues
- 32 aa
- Domains
- PF02008 · CXXC zinc finger domain
- 3D models
- 1 active PDB
- Templates
- 2KKF
- Sources
- Structure model
Transcription factor
CXXC-type zinc finger protein 1 (CpG-binding protein) (PHD finger and CXXC domain-containing protein 1)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 219 aa
Only entries with a generated matrix are shown here.
No generated PWM in this category.
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M01910_2.00 | NN 70+% | CisBP | GCGGAAATT | 78.5% identity | Open · Scan | |
| M01908_2.00 | NN 70+% | CisBP | TTTGCGG | 74.0% identity | Open · Scan | |
| M01906_2.00 | NN 70+% | CisBP | CGTACGTA | 71.4% identity | Open · Scan | |
| M01907_2.00 | NN 70+% | CisBP | TTCGCGTAAACG | 70.3% identity | Open · Scan |
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M01915_2.00 | NN 70-40% | CisBP | ATTACGTAAT | 64.2% identity | Open · Scan | |
| M01913_2.00 | NN 70-40% | CisBP | GGCAGCGGGG | 58.6% identity | Open · Scan | |
| M01921_2.00 | NN 70-40% | CisBP | AAATTACGGA | 50.0% identity | Open · Scan |
No generated PWM in this category.
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_B4DGL1:164:195_2kkf_A_1 | 2kkf | 164-195 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 29-73 | PF00628 | PHD-finger | No overlap with loaded model regions |
| 163-197 | PF02008 | CXXC zinc finger domain | overlaps 164-195 |