ModCRE DB

Transcription factor

B4DH67

cDNA FLJ57109, highly similar to Zinc finger protein 711

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 360 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0146.1 NN 70+% JASPAR GGGGCCGAGGCCTG 74.5% identity Open · Scan
Nearest Neighbor (70% - 40%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 57.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 51.0% identity Open · Scan
M06802_2.00 NN 70-40% CisBP ACCTTCCCCAGATAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 360 aa
103-207

Region 103-207 0 PWM

Residues
105 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 103-2071 model
Actions
Predicted = Low TFS_B4DH67:103:207_5eh2_F_1 5eh2 103-207 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
104-126PF00096Zinc finger, C2H2 typeoverlaps 103-207
161-180PF00096Zinc finger, C2H2 typeoverlaps 103-207
189-212PF00096Zinc finger, C2H2 typeoverlaps 103-207
218-240PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
276-297PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions