ModCRE DB

Transcription factor

B4DHL1

cDNA FLJ56078, highly similar to Suppressor of hairy wing homolog 4

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1042 aa

6 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08332_2.00 NN 70-40% CisBP TCTCTCCAGTGTGAATTCTCTGAT 51.9% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B4DHL1_B4DHL1_HUMAN:418:532_5ei9_E_1 ModCRE Homology model GCGGCTTTTGGCAGGCC Region 418-532 · 1 3D model Open · Scan
TFS_tr_B4DHL1_B4DHL1_HUMAN:423:560_5v3j_E_1 ModCRE Homology model TTCCAGTCGATCTGTC Region 423-560 · 1 3D model Open · Scan
TFS_tr_B4DHL1_B4DHL1_HUMAN:423:560_5v3m_C_1 ModCRE Homology model TTCCTTTCTCTCGAAGA Region 423-560 · 1 3D model Open · Scan
TFS_tr_B4DHL1_B4DHL1_HUMAN:423:560_5wjq_D_1 ModCRE Homology model TCCCTTTGTATCGATCA Region 423-560 · 1 3D model Open · Scan
TFS_tr_B4DHL1_B4DHL1_HUMAN:423:561_5t0u_A_1 ModCRE Homology model CGCTAGCTGGAAAGTATATTTAC Region 423-561 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1042 aa
418-562

Region 418-562 5 PWM

Residues
145 aa
Domains
No overlapping PFAM annotation recorded
3D models
10 active PDBs · 5 summary rows
Templates
5EI9, 5T0U, 5V3J, 5V3M, 5WJQ, 6ML2, 6ML4, 6ML5, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 5 summary rows
Region 418-56210 models · 5 summary rows
Actions
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:418:532_5ei9_E_1 5ei9 418-532 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml2_A_1 6ml2 422-562 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml4_A_1 6ml4 422-562 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml5_A_1 6ml5 422-562 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml6_A_1 6ml6 422-562 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml7_A_1 6ml7 422-562 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:423:560_5v3j_E_1 5v3j 423-560 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:423:560_5v3m_C_1 5v3m 423-560 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:423:560_5wjq_D_1 5wjq 423-560 View model · PDB
Predicted = Low TFS_tr_B4DHL1_B4DHL1_HUMAN:423:561_5t0u_A_1 5t0u 423-561 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ml7 410:582 422 562 P:A · DNA:E,F 27.7% / 40.4% 95 View · PDB TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml7_A_1
2 6ml6 410:582 422 562 P:A · DNA:E,F 27.7% / 40.4% 95 View · PDB TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml6_A_1
3 6ml4 410:582 422 562 P:A · DNA:E,F 27.7% / 40.4% 95 View · PDB TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml4_A_1
4 6ml5 410:582 422 562 P:A · DNA:E,F 27.7% / 40.4% 95 View · PDB TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml5_A_1
5 6ml2 410:582 422 562 P:A · DNA:E,F 27.0% / 39.7% 96 View · PDB TFS_tr_B4DHL1_B4DHL1_HUMAN:422:562_6ml2_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
108-292PF13836Domain of unknown function (DUF4195)No overlap with loaded model regions
686-727PF25429POGZ-like double zinc fingerNo overlap with loaded model regions
749-786PF25414Z280C/D-like C2H2 zinc fingerNo overlap with loaded model regions