Region 442-510 0 PWM
- Residues
- 69 aa
- Domains
- PF00505 · HMG (high mobility group) box
- 3D models
- 1 active PDB
- Templates
- 1HRZ
- Sources
- Structure model
Transcription factor
B4DJ36
HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 524 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M00194_2.00 | NN 70+% | CisBP | GTGAATGA | 94.3% identity | Open · Scan |
Nearest Neighbor (70% - 40%)2
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
524 aa
442-510
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 442-5101 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_B4DJ36:442:510_1hrz_A_1 | 1hrz | 442-510 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 225-349 | PF08517 | Ataxin-1 and HBP1 module (AXH) | No overlap with loaded model regions |
| 445-508 | PF00505 | HMG (high mobility group) box | overlaps 442-510 |