ModCRE DB

Transcription factor

B4DJ46

cDNA FLJ54424, highly similar to Zinc finger protein 93

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 257 aa

154 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 77.6% identity Open · Scan
M08934_2.00 NN 70+% CisBP GCTGTACCTGCTTATTAGGC 75.5% identity Open · Scan
Nearest Neighbor (70% - 40%)152
MotifPredictionSourceDNA bindingSupportLogoActions
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 67.8% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 65.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 64.9% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 64.5% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 64.5% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 64.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 63.3% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.8% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 62.5% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 61.7% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 61.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 61.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 61.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 61.0% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 60.9% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 60.9% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.7% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 60.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 60.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 60.1% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 60.1% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 60.1% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 60.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 60.0% identity Open · Scan
M06053_2.00 NN 70-40% CisBP GAAGCCATAACGGC 60.0% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 60.0% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 60.0% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 59.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 59.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 59.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 59.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 59.0% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 59.0% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.9% identity Open · Scan
M00619_2.00 NN 70-40% CisBP TAAATCACGG 58.6% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 58.6% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.5% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 58.5% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 58.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 58.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 58.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.9% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 57.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 57.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 57.8% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 57.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 57.4% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 57.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.2% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 57.0% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 56.8% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 56.8% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 56.8% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 56.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.6% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 56.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.5% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 56.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 56.2% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 56.2% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 56.0% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 55.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 55.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 55.6% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 55.5% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 55.4% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 55.4% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 55.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.1% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 55.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.0% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 55.0% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 54.9% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 54.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 54.7% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.6% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 54.2% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 54.2% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 54.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.2% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 54.2% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 54.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.0% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 53.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.5% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.5% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 53.3% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 53.3% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 53.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.1% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 53.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.0% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 53.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.9% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 52.5% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.5% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 52.3% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 52.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 51.9% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 51.9% identity Open · Scan
M06050_2.00 NN 70-40% CisBP CACCTGT 51.8% identity Open · Scan
M06051_2.00 NN 70-40% CisBP CACCTGC 51.8% identity Open · Scan
M03701_2.00 NN 70-40% CisBP ATTACAACAACAACC 51.7% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 51.6% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 51.6% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 51.6% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 51.4% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 51.4% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 51.3% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.3% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 51.3% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.9% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 50.6% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.3% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.3% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M00780_2.00 NN 70-40% CisBP GACCCCCCGG 50.0% identity Open · Scan
M01453_2.00 NN 70-40% CisBP ACGCCACA 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 50.0% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 50.0% identity Open · Scan
M08233_2.00 NN 70-40% CisBP CCCCTGCTGGG 50.0% identity Open · Scan
M09013_2.00 NN 70-40% CisBP GGCCCCCTGCTGTGA 50.0% identity Open · Scan
MA0696.1 NN 70-40% JASPAR GACCCCCCGCTGTG 50.0% identity Open · Scan
MA0697.1 NN 70-40% JASPAR GACCCCCCGCTGCGC 50.0% identity Open · Scan
MA0751.1 NN 70-40% JASPAR GACCCCCCGCTGTGC 50.0% identity Open · Scan
MA1584.1 NN 70-40% JASPAR CGACCCCCCGCTGTGC 50.0% identity Open · Scan
MA1628.1 NN 70-40% JASPAR CACAGCAGGGG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 257 aa
1-253

Region 1-253 0 PWM

Residues
253 aa
Domains
PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-2531 model
Actions
Predicted = Low TFS_B4DJ46:1:253_5v3j_E_1 5v3j 1-253 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
21-45PF13465Zinc-finger double domainoverlaps 1-253
62-84PF00096Zinc finger, C2H2 typeoverlaps 1-253
104-129PF13465Zinc-finger double domainoverlaps 1-253
132-157PF13465Zinc-finger double domainoverlaps 1-253
174-196PF00096Zinc finger, C2H2 typeoverlaps 1-253
202-224PF00096Zinc finger, C2H2 typeoverlaps 1-253
230-252PF00096Zinc finger, C2H2 typeoverlaps 1-253