ModCRE DB

Transcription factor

B4DJE4

cDNA FLJ52606, moderately similar to Zinc finger protein 79

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 221 aa

119 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)114
MotifPredictionSourceDNA bindingSupportLogoActions
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 64.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 61.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 61.1% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 60.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 60.4% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 60.4% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 60.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 59.8% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 59.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 58.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.6% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 58.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 57.7% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 57.6% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 57.6% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 57.4% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 57.4% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 57.4% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 57.4% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 57.1% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 57.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.1% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 57.0% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 56.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 56.7% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 56.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 56.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.1% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 56.1% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 56.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.1% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 56.1% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 56.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 56.0% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 55.8% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 55.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.8% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 55.8% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 55.5% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 55.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 55.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.2% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 55.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.9% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 54.9% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 54.9% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 54.9% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.6% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.6% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 54.6% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.4% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 54.3% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 54.3% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 54.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 53.7% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.7% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 53.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.3% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 53.1% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 53.1% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 53.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.0% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.0% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 52.9% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.7% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 52.7% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 52.7% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.5% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 52.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 52.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 52.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 52.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 52.1% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 52.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.8% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 51.8% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 51.5% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 51.3% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.2% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.2% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 51.2% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B4DJE4_B4DJE4_HUMAN:62:163_5eh2_F_1 ModCRE Homology model ACCACCCCCCCCCCCGGGA Region 62-163 · 1 3D model Open · Scan
TFS_tr_B4DJE4_B4DJE4_HUMAN:63:217_5v3j_E_1 ModCRE Homology model AAGTGGGGCCGGGGAGTGCCCACGCG Region 63-217 · 1 3D model Open · Scan
TFS_tr_B4DJE4_B4DJE4_HUMAN:63:217_5v3m_C_1 ModCRE Homology model GCGTCGTACGCCCCCCCCGTAGCGC Region 63-217 · 1 3D model Open · Scan
TFS_tr_B4DJE4_B4DJE4_HUMAN:63:221_5wjq_D_1 ModCRE Homology model TGTTGGGCCGCCCCTGATTTAGCGCC Region 63-221 · 1 3D model Open · Scan
TFS_tr_B4DJE4_B4DJE4_HUMAN:65:216_2i13_A_1 ModCRE Homology model AATAAAACTAACGTACTGCAT Region 65-216 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 221 aa
62-221

Region 62-221 5 PWM

Residues
160 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EH2, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 62-2216 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B4DJE4_B4DJE4_HUMAN:82:131_1llm_D_1 1llm 82-131 View model · PDB
Predicted = Low TFS_tr_B4DJE4_B4DJE4_HUMAN:62:163_5eh2_F_1 5eh2 62-163 View model · PDB
Predicted = Low TFS_tr_B4DJE4_B4DJE4_HUMAN:63:217_5v3j_E_1 5v3j 63-217 View model · PDB
Predicted = Low TFS_tr_B4DJE4_B4DJE4_HUMAN:63:217_5v3m_C_1 5v3m 63-217 View model · PDB
Predicted = Low TFS_tr_B4DJE4_B4DJE4_HUMAN:63:221_5wjq_D_1 5wjq 63-221 View model · PDB
Predicted = Low TFS_tr_B4DJE4_B4DJE4_HUMAN:65:216_2i13_A_1 2i13 65-216 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2i13 62:221 65 216 P:A · DNA:C,D 55.2% / 65.6% 98 View · PDB TFS_tr_B4DJE4_B4DJE4_HUMAN:65:216_2i13_A_1
5 5eh2 62:221 62 163 P:F · DNA:C,D 53.9% / 67.6% 93 View · PDB TFS_tr_B4DJE4_B4DJE4_HUMAN:62:163_5eh2_F_1
3 5v3m 62:221 63 217 P:C · DNA:A,B 51.0% / 68.8% 55 View · PDB TFS_tr_B4DJE4_B4DJE4_HUMAN:63:217_5v3m_C_1
4 5v3j 62:221 63 217 P:E · DNA:A,B 51.0% / 68.8% 55 View · PDB TFS_tr_B4DJE4_B4DJE4_HUMAN:63:217_5v3j_E_1
2 5wjq 62:221 63 221 P:D · DNA:A,B 50.3% / 68.3% 56 View · PDB TFS_tr_B4DJE4_B4DJE4_HUMAN:63:221_5wjq_D_1
1 1llm 62:221 82,82 131,131 P:C,D · DNA:A,B 46.0% / 60.0% 57,58 View · PDB DIMER_tr_B4DJE4_B4DJE4_HUMAN:82:131_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
84-106PF00096Zinc finger, C2H2 typeoverlaps 62-221
112-134PF00096Zinc finger, C2H2 typeoverlaps 62-221
140-161PF00096Zinc finger, C2H2 typeoverlaps 62-221
195-216PF00096Zinc finger, C2H2 typeoverlaps 62-221