Region 2-26 0 PWM
- Residues
- 25 aa
- Domains
- PF00046 · Homeodomain
- 3D models
- 1 active PDB
- Templates
- 5Z2T
- Sources
- Structure model
Transcription factor
B4DM62
cDNA FLJ51244, highly similar to Homeobox protein OTX1
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 288 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
288 aa
2-26
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 2-261 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_B4DM62:2:26_5z2t_C_1 | 5z2t | 2-26 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 2-29 | PF00046 | Homeodomain | overlaps 2-26 |
| 112-213 | PF03529 | Otx1 transcription factor | No overlap with loaded model regions |