ModCRE DB

Transcription factor

B4DMV4

cDNA FLJ58267, highly similar to Forkhead box protein P1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 541 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0481.1 Known JASPAR CAAAAGTAAACAAAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 541 aa
328-409

Region 328-409 0 PWM

Residues
82 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 328-4091 model
Actions
Predicted = Low DIMER_B4DMV4:328:409_2a07_F_1 2a07 328-409 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
166-234PF16159FOXP coiled-coil domainNo overlap with loaded model regions
329-405PF00250Forkhead domainoverlaps 328-409