Transcription factor

B4DPA6

LIM/homeobox protein Lhx1 (Homeobox protein Lim-1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 301 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
MA1518.1	NN 70+%	JASPAR	GCAATTAC	93.8% identity	Open · Scan
M00445_2.00	NN 70+%	CisBP	TAATTAATT	80.5% identity	Open · Scan
MA1519.1	NN 70+%	JASPAR	GTAATTAA	80.0% identity	Open · Scan

Nearest Neighbor (70% - 40%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M03853_2.00	NN 70-40%	CisBP	GTAATTGC	53.3% identity		Open · Scan
MA0700.1	NN 70-40%	JASPAR	ACTAATTAAC	50.9% identity		Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 301 aa

163-212

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 163-2121 model

				Actions
Predicted = Low	DIMER_B4DPA6:163:212_5hod_A_1	5hod	163-212	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
4-59	PF00412	LIM domain	No overlap with loaded model regions
63-120	PF00412	LIM domain	No overlap with loaded model regions
167-212	PF00046	Homeodomain	overlaps 163-212