Transcription factor

B4DPC1

cDNA FLJ51920, highly similar to TATA-box-binding protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 316 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
M00216_2.00	NN 70+%	CisBP	TTTATAT	97.7% identity	Open · Scan
MA0108.2	NN 70+%	JASPAR	GTATAAAAGGCGGGG	93.2% identity	Open · Scan
M01567_2.00	NN 70+%	CisBP	AATATAT	80.2% identity	Open · Scan

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 316 aa

130-314

Residues: 185 aa
Domains: PF00352 · Transcription factor TFIID (or TATA-binding protein, TBP) PF00352 · Transcription factor TFIID (or TATA-binding protein, TBP)
3D models: 1 active PDB
Templates: 5IY6
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 130-3141 model

				Actions
Predicted = Low	TFS_B4DPC1:130:314_5iy6_P_1	5iy6	130-314	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
140-221	PF00352	Transcription factor TFIID (or TATA-binding protein, TBP)	overlaps 130-314
229-311	PF00352	Transcription factor TFIID (or TATA-binding protein, TBP)	overlaps 130-314