Region 95-122 4 PWM
- Residues
- 28 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 1UBD, 6E93, 6E94, 8CUC
- Sources
- Predicted = Low
Transcription factor
B4DPE6
cDNA FLJ58270, highly similar to SLC2A4 regulator
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 282 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_B4DPE6_B4DPE6_HUMAN:100:122_6e93_A_1 | ModCRE | Homology model | AAAATAGCCCCC | Region 100-122 · 1 3D model | Open · Scan | |
| TFS_tr_B4DPE6_B4DPE6_HUMAN:100:122_6e94_A_1 | ModCRE | Homology model | TTTAATTACCCC | Region 100-122 · 1 3D model | Open · Scan | |
| TFS_tr_B4DPE6_B4DPE6_HUMAN:102:117_8cuc_F_1 | ModCRE | Homology model | GGGGTATTTG | Region 102-117 · 1 3D model | Open · Scan | |
| TFS_tr_B4DPE6_B4DPE6_HUMAN:250:282_7dta_A_1 | ModCRE | Homology model | CCGACGCGGCC | Region 250-282 · 1 3D model | Open · Scan | |
| TFS_tr_B4DPE6_B4DPE6_HUMAN:95:118_1ubd_C_1 | ModCRE | Homology model | CCGGGCTAAACC | Region 95-118 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
282 aa
95-122
250-282
Region 250-282 1 PWM
- Residues
- 33 aa
- Domains
- PF27556 · Zinc finger protein 704 C-terminal domain
- 3D models
- 1 active PDB · 1 summary row
- Templates
- 7DTA
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 95-1224 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_B4DPE6_B4DPE6_HUMAN:100:122_6e93_A_1 | 6e93 | 100-122 | View model · PDB |
| Predicted = Low | TFS_tr_B4DPE6_B4DPE6_HUMAN:100:122_6e94_A_1 | 6e94 | 100-122 | View model · PDB |
| Predicted = Low | TFS_tr_B4DPE6_B4DPE6_HUMAN:102:117_8cuc_F_1 | 8cuc | 102-117 | View model · PDB |
| Predicted = Low | TFS_tr_B4DPE6_B4DPE6_HUMAN:95:118_1ubd_C_1 | 1ubd | 95-118 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 5 | 8cuc | 250:282 | 102 | 117 | P:F · DNA:A,B | 62.5% / 75.0% | 29 | View · PDB TFS_tr_B4DPE6_B4DPE6_HUMAN:102:117_8cuc_F_1 |
| 2 | 6e94 | 250:282 | 100 | 122 | P:A · DNA:C,D | 47.8% / 65.2% | 19 | View · PDB TFS_tr_B4DPE6_B4DPE6_HUMAN:100:122_6e94_A_1 |
| 4 | 6e93 | 250:282 | 100 | 122 | P:A · DNA:C,D | 43.5% / 65.2% | 19 | View · PDB TFS_tr_B4DPE6_B4DPE6_HUMAN:100:122_6e93_A_1 |
| 3 | 1ubd | 250:282 | 95 | 118 | P:C · DNA:A,B | 37.5% / 62.5% | 21 | View · PDB TFS_tr_B4DPE6_B4DPE6_HUMAN:95:118_1ubd_C_1 |
Region 250-2821 model · 1 summary row
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_B4DPE6_B4DPE6_HUMAN:250:282_7dta_A_1 | 7dta | 250-282 | View model · PDB |
Model-summary evidence imported for this region.
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 249-282 | PF27556 | Zinc finger protein 704 C-terminal domain | overlaps 250-282 |