ModCRE DB

Transcription factor

B4DPL3

cDNA FLJ55171, highly similar to Transcription factor EB

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 490 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0692.1 NN 70+% JASPAR ATCACGTGAC 99.7% identity Open · Scan
M01728_2.00 NN 70+% CisBP CACGTGAC 93.2% identity Open · Scan
Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M06003_2.00 NN 70-40% CisBP TCACGTG 60.1% identity Open · Scan
M01762_2.00 NN 70-40% CisBP ATCACGTGAT 54.5% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 490 aa
246-308

Region 246-308 0 PWM

Residues
63 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
5I50
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 246-3081 model
Actions
Predicted = Low DIMER_B4DPL3:246:308_5i50_B_1 5i50 246-308 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-176PF15951MITF/TFEB/TFEC/TFE3 N-terminusNo overlap with loaded model regions
250-303PF00010Helix-loop-helix DNA-binding domainoverlaps 246-308
335-487PF11851Domain of unknown function (DUF3371)No overlap with loaded model regions