ModCRE DB

Transcription factor

B4DRM0

Zinc finger protein 182 (Zinc finger protein 21)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 619 aa

64 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.2% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 62.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 62.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 60.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 59.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.4% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 58.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 58.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 57.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 56.6% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 56.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.8% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 55.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 53.2% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 53.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.9% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 52.2% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.8% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.7% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.6% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.2% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 50.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.6% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 50.5% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.3% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B4DRM0_B4DRM0_HUMAN:241:517_5v3j_E_1 ModCRE Homology model CCTCCCCCTTTGTCCCCTCCCGGGCG Region 241-517 · 1 3D model Open · Scan
TFS_tr_B4DRM0_B4DRM0_HUMAN:241:517_5v3m_C_1 ModCRE Homology model CCCTCCACCCTCCCCACTCCCGGCCC Region 241-517 · 1 3D model Open · Scan
TFS_tr_B4DRM0_B4DRM0_HUMAN:267:545_5wjq_D_1 ModCRE Homology model CGAGGGCCCCCCCCCCCCTTTACCCCCC Region 267-545 · 1 3D model Open · Scan
TFS_tr_B4DRM0_B4DRM0_HUMAN:447:600_2i13_A_1 ModCRE Homology model ACTCTAAGCCCCCCGCGCTAC Region 447-600 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 619 aa
212-600

Region 212-600 4 PWM

Residues
389 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 212-6006 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B4DRM0_B4DRM0_HUMAN:212:256_1llm_D_1 1llm 212-256 View model · PDB
Predicted = Low TFS_tr_B4DRM0_B4DRM0_HUMAN:241:517_5v3j_E_1 5v3j 241-517 View model · PDB
Predicted = Low TFS_tr_B4DRM0_B4DRM0_HUMAN:241:517_5v3m_C_1 5v3m 241-517 View model · PDB
Predicted = Low TFS_tr_B4DRM0_B4DRM0_HUMAN:267:545_5wjq_D_1 5wjq 267-545 View model · PDB
Predicted = Low TFS_tr_B4DRM0_B4DRM0_HUMAN:298:596_7w1m_H_1 7w1m 298-596 View model · PDB
Predicted = Low TFS_tr_B4DRM0_B4DRM0_HUMAN:447:600_2i13_A_1 2i13 447-600 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 212:601 447 600 P:A · DNA:C,D 62.3% / 72.7% 100 View · PDB TFS_tr_B4DRM0_B4DRM0_HUMAN:447:600_2i13_A_1
1 5wjq 212:601 267 545 P:D · DNA:A,B 52.0% / 68.8% 99 View · PDB TFS_tr_B4DRM0_B4DRM0_HUMAN:267:545_5wjq_D_1
2 5v3m 212:601 241 517 P:C · DNA:A,B 51.6% / 68.2% 100 View · PDB TFS_tr_B4DRM0_B4DRM0_HUMAN:241:517_5v3m_C_1
3 5v3j 212:601 241 517 P:E · DNA:A,B 51.6% / 68.2% 100 View · PDB TFS_tr_B4DRM0_B4DRM0_HUMAN:241:517_5v3j_E_1
1 1llm 212:601 212,212 256,256 P:C,D · DNA:A,B 51.1% / 66.7% 51,52 View · PDB DIMER_tr_B4DRM0_B4DRM0_HUMAN:212:256_1llm_D_1
5 7w1m 212:601 298 596 P:H · DNA:F,G 38.0% / 54.9% 92 View · PDB TFS_tr_B4DRM0_B4DRM0_HUMAN:298:596_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
7-48PF01352KRAB boxNo overlap with loaded model regions
214-236PF00096Zinc finger, C2H2 typeoverlaps 212-600
244-264PF00096Zinc finger, C2H2 typeoverlaps 212-600
270-292PF00096Zinc finger, C2H2 typeoverlaps 212-600
298-320PF00096Zinc finger, C2H2 typeoverlaps 212-600
326-348PF00096Zinc finger, C2H2 typeoverlaps 212-600
354-376PF00096Zinc finger, C2H2 typeoverlaps 212-600
382-404PF00096Zinc finger, C2H2 typeoverlaps 212-600
410-432PF00096Zinc finger, C2H2 typeoverlaps 212-600
438-460PF00096Zinc finger, C2H2 typeoverlaps 212-600
466-488PF00096Zinc finger, C2H2 typeoverlaps 212-600
494-516PF00096Zinc finger, C2H2 typeoverlaps 212-600
522-544PF00096Zinc finger, C2H2 typeoverlaps 212-600
550-572PF00096Zinc finger, C2H2 typeoverlaps 212-600
578-600PF00096Zinc finger, C2H2 typeoverlaps 212-600