Transcription factor

B4DS48

cDNA FLJ54434, highly similar to Myelin transcription factor 1-like protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 942 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_B4DS48_B4DS48_HUMAN:506:577_2mf8_A_1	ModCRE	Homology model	TAAAACTTTTGAA	Region 506-577 · 1 3D model		Open · Scan
TFS_tr_B4DS48_B4DS48_HUMAN:902:932_2jx1_A_1	ModCRE	Homology model	GGATTTAA	Region 902-932 · 1 3D model		Open · Scan

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 942 aa

506-577

902-932

Scan this region Show models

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

2 active PDB models 2 summary rows

Region 506-5771 model · 1 summary row

				Actions
Predicted = Low	TFS_tr_B4DS48_B4DS48_HUMAN:506:577_2mf8_A_1	2mf8	506-577	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	2mf8	506:577	506	577	P:A · DNA:B,C	63.9% / 73.6%	96	View · PDB TFS_tr_B4DS48_B4DS48_HUMAN:506:577_2mf8_A_1

Region 902-9321 model · 1 summary row

				Actions
Predicted = Low	TFS_tr_B4DS48_B4DS48_HUMAN:902:932_2jx1_A_1	2jx1	902-932	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
2	2jx1	506:577	902	932	P:A · DNA:B,C	96.8% / 100.0%	100	View · PDB TFS_tr_B4DS48_B4DS48_HUMAN:902:932_2jx1_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
31-58	PF01530	Zinc finger, C2HC type	No overlap with loaded model regions
505-531	PF01530	Zinc finger, C2HC type	overlaps 506-577
549-577	PF01530	Zinc finger, C2HC type	overlaps 506-577
621-872	PF08474	Myelin transcription factor 1	No overlap with loaded model regions
904-932	PF01530	Zinc finger, C2HC type	overlaps 902-932