ModCRE DB

Transcription factor

B4DS70

Zinc finger protein 136

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 474 aa

57 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA1588.1 NN 70+% JASPAR GAATTCTTGGTTGAC 99.7% identity Open · Scan
Nearest Neighbor (70% - 40%)56
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 68.2% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 65.1% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 61.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 57.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 57.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 57.6% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 57.3% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 57.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 56.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 56.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 56.4% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 55.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 55.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 54.7% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 54.6% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 54.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 53.9% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 53.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 53.1% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 52.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.9% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 52.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 52.2% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 52.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.7% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.7% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.7% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 51.3% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 51.3% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 51.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 51.2% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 51.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 51.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.9% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.8% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 50.8% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.5% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 50.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 50.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 474 aa
155-433

Region 155-433 0 PWM

Residues
279 aa
Domains
PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 155-4331 model
Actions
Predicted = Low TFS_B4DS70:155:433_5wjq_D_1 5wjq 155-433 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
102-124PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
130-152PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
158-180PF13912C2H2-type zinc fingeroverlaps 155-433
186-208PF00096Zinc finger, C2H2 typeoverlaps 155-433
214-236PF00096Zinc finger, C2H2 typeoverlaps 155-433
242-264PF00096Zinc finger, C2H2 typeoverlaps 155-433
270-292PF00096Zinc finger, C2H2 typeoverlaps 155-433
298-320PF00096Zinc finger, C2H2 typeoverlaps 155-433
326-348PF00096Zinc finger, C2H2 typeoverlaps 155-433
354-376PF00096Zinc finger, C2H2 typeoverlaps 155-433
382-404PF00096Zinc finger, C2H2 typeoverlaps 155-433
410-432PF00096Zinc finger, C2H2 typeoverlaps 155-433
438-460PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions