ModCRE DB

Transcription factor

B4DSF4

Zinc finger protein 8

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 290 aa

65 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00149_2.00 NN 70+% CisBP CGTACGCC 85.5% identity Open · Scan
Nearest Neighbor (70% - 40%)64
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 62.0% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.4% identity Open · Scan
MA0737.1 NN 70-40% JASPAR GACCCCCCACGAAG 58.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.5% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 57.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 56.3% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.3% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 56.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 56.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 56.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.9% identity Open · Scan
M06050_2.00 NN 70-40% CisBP CACCTGT 55.5% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 53.7% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 53.7% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 53.6% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 53.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.1% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 53.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 53.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 52.9% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.6% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 52.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 52.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 52.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.9% identity Open · Scan
M01440_2.00 NN 70-40% CisBP TACGCCAC 51.8% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 51.8% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 51.8% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 51.7% identity Open · Scan
M06053_2.00 NN 70-40% CisBP GAAGCCATAACGGC 51.7% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.7% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.4% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 51.3% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 50.9% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 50.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 50.7% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.7% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 50.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 50.4% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 50.4% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.4% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 50.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.0% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 50.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 290 aa
1-107

Region 1-107 0 PWM

Residues
107 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-1071 model
Actions
Predicted = Low TFS_B4DSF4:1:107_5eh2_F_1 5eh2 1-107 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
2-22PF00096Zinc finger, C2H2 typeoverlaps 1-107
28-50PF00096Zinc finger, C2H2 typeoverlaps 1-107
56-78PF00096Zinc finger, C2H2 typeoverlaps 1-107
84-106PF00096Zinc finger, C2H2 typeoverlaps 1-107
112-134PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
182-204PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions