ModCRE DB

Transcription factor

B4DWN5

cDNA FLJ51352, highly similar to Hepatocyte nuclear factor 3-beta

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 343 aa

49 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)9
MotifPredictionSourceDNA bindingSupportLogoActions
M01990_2.00 NN 70+% CisBP TTGTTTACA 87.0% identity Open · Scan
M03735_2.00 NN 70+% CisBP AAACAATAATATT 85.3% identity Open · Scan
M09104_2.00 NN 70+% CisBP CCTTGTTTACTTT 78.5% identity Open · Scan
MA0047.3 NN 70+% JASPAR ATGTAAACATA 74.8% identity Open · Scan
MA0047.2 NN 70+% JASPAR TGTTTACTTAGG 72.5% identity Open · Scan
M01982_2.00 NN 70+% CisBP TATGTAAACA 72.4% identity Open · Scan
MA0032.1 NN 70+% JASPAR GGTAAGTA 72.4% identity Open · Scan
MA0846.1 NN 70+% JASPAR TAAGTAAACAAA 72.4% identity Open · Scan
MA0047.1 NN 70+% JASPAR CAATATTTACTT 71.2% identity Open · Scan
Nearest Neighbor (70% - 40%)40
MotifPredictionSourceDNA bindingSupportLogoActions
M01983_2.00 NN 70-40% CisBP TGTTTACATA 69.7% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 69.7% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 69.0% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 67.5% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 67.5% identity Open · Scan
M03034_2.00 NN 70-40% CisBP GTAAACA 67.1% identity Open · Scan
MA0031.1 NN 70-40% JASPAR GTAAACAT 65.3% identity Open · Scan
MA0847.1 NN 70-40% JASPAR GTAAACA 65.3% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 65.1% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 64.2% identity Open · Scan
MA0041.1 NN 70-40% JASPAR GAATGTTTGTTT 64.2% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 63.6% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 63.5% identity Open · Scan
M00665_2.00 NN 70-40% CisBP ATGTAAACAAA 63.3% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 62.7% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 62.3% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 62.3% identity Open · Scan
M10565_2.00 NN 70-40% CisBP AAACAAACAATC 61.6% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 61.0% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 61.0% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 61.0% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 59.3% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 58.0% identity Open · Scan
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 57.1% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 56.8% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 56.8% identity Open · Scan
MA0148.1 NN 70-40% JASPAR TGTTTACTTTG 56.4% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 56.2% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 56.2% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 56.1% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 56.1% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 55.4% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 53.6% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 53.1% identity Open · Scan
M04835_2.00 NN 70-40% CisBP ACGCGTCGTTACGACGCGT 52.4% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 52.2% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 51.8% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 51.0% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 51.0% identity Open · Scan
M01991_2.00 NN 70-40% CisBP ATTGTAAACAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 343 aa
45-106

Region 45-106 0 PWM

Residues
62 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 45-1061 model
Actions
Predicted = Low DIMER_B4DWN5:45:106_2a07_F_1 2a07 45-106 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
20-44PF08430Forkhead N-terminal regionNo overlap with loaded model regions
45-130PF00250Forkhead domainoverlaps 45-106
259-332PF09354HNF3 C-terminal domainNo overlap with loaded model regions