Region 290-360 0 PWM
- Residues
- 71 aa
- Domains
- PF00505 · HMG (high mobility group) box
- 3D models
- 1 active PDB
- Templates
- 4EUW
- Sources
- Structure model
Transcription factor
B4DX26
cDNA FLJ58547, highly similar to SOX-13 protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 489 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
489 aa
290-360
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 290-3601 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_B4DX26:290:360_4euw_A_1 | 4euw | 290-360 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 291-359 | PF00505 | HMG (high mobility group) box | overlaps 290-360 |