ModCRE DB

Transcription factor

B4DX79

cDNA FLJ55613, highly similar to Zinc finger protein 595

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 465 aa

129 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 70.9% identity Open · Scan
Nearest Neighbor (70% - 40%)128
MotifPredictionSourceDNA bindingSupportLogoActions
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 67.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 67.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 66.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 65.8% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 63.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 62.5% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 62.1% identity Open · Scan
M04480_2.00 NN 70-40% CisBP ATTGATTACCCACCCTAC 61.2% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 61.2% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 61.2% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 61.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 60.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 59.3% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 59.3% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 58.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.6% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 58.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.1% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 58.0% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 58.0% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 58.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 58.0% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 58.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 57.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 57.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.3% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.8% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.2% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 56.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.2% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 56.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 56.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.7% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 55.4% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 55.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.3% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 55.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.2% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 55.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.1% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 54.8% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 54.8% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 54.8% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 54.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 54.8% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 54.7% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.6% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.6% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 54.5% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.4% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 54.2% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 54.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 54.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.4% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 53.1% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 53.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 52.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.6% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 52.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.3% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 52.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.0% identity Open · Scan
M01174_2.00 NN 70-40% CisBP GCTACCGT 51.8% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 51.8% identity Open · Scan
MA1542.1 NN 70-40% JASPAR TGCTACTGTT 51.8% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 51.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 51.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 51.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 51.6% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.6% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.6% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 51.6% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.5% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 51.5% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 51.4% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 51.3% identity Open · Scan
M00132_2.00 NN 70-40% CisBP TGCTACCGTT 51.2% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 51.1% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.1% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.1% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 50.8% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.4% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.3% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.2% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.2% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.1% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.0% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 50.0% identity Open · Scan
M06152_2.00 NN 70-40% CisBP TACCCCTTC 50.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 50.0% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 50.0% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 465 aa
182-292

Region 182-292 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 182-2921 model
Actions
Predicted = Low TFS_B4DX79:182:292_5egb_A_1 5egb 182-292 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
17-39PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
45-67PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
73-95PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
101-123PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
129-151PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
157-179PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
185-207PF00096Zinc finger, C2H2 typeoverlaps 182-292
213-235PF00096Zinc finger, C2H2 typeoverlaps 182-292
241-263PF00096Zinc finger, C2H2 typeoverlaps 182-292
269-291PF00096Zinc finger, C2H2 typeoverlaps 182-292
297-319PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
325-347PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
353-375PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
381-403PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
409-431PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
437-459PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions