Transcription factor

B4DYZ9

RING-type E3 ubiquitin transferase (EC 2.3.2.27)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 961 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_B4DYZ9_B4DYZ9_HUMAN:837:910_8hal_K_1	ModCRE	Homology model	TCAAGTCCCC	Region 837-910 · 1 3D model		Open · Scan

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 961 aa

837-910

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model 1 summary row

Region 837-9101 model · 1 summary row

				Actions
Predicted = Low	TFS_tr_B4DYZ9_B4DYZ9_HUMAN:837:910_8hal_K_1	8hal	837-910	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	8hal	837:910	837	910	P:K · DNA:I,J	44.6% / 58.1%	14	View · PDB TFS_tr_B4DYZ9_B4DYZ9_HUMAN:837:910_8hal_K_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
132-168	PF00643	B-box zinc finger	No overlap with loaded model regions
740-781	PF00628	PHD-finger	No overlap with loaded model regions
819-899	PF00439	Bromodomain	overlaps 837-910