ModCRE DB

Transcription factor

B4DZ50

Transcription factor 12 (DNA-binding protein HTF4) (E-box-binding protein) (Transcription factor HTF-4)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 294 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M07806_2.00 NN 70+% CisBP ACACCTGG 99.6% identity Open · Scan
MA1648.1 NN 70+% JASPAR CGCACCTGCCG 99.3% identity Open · Scan
MA0521.1 NN 70+% JASPAR AACAGCTGCAG 92.2% identity Open · Scan
M03593_2.00 NN 70+% CisBP ACACCTGCA 75.2% identity Open · Scan
Nearest Neighbor (70% - 40%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M04215_2.00 NN 70-40% CisBP GCACCTGC 65.5% identity Open · Scan
M08775_2.00 NN 70-40% CisBP TGCACCTGG 65.5% identity Open · Scan
MA0830.1 NN 70-40% JASPAR CGCACCTGCT 65.2% identity Open · Scan
M09466_2.00 NN 70-40% CisBP GCAGCTGTGT 57.3% identity Open · Scan
MA0092.1 NN 70-40% JASPAR GGTCTGGCAT 57.3% identity Open · Scan
MA0091.1 NN 70-40% JASPAR CGACCATCTGTT 56.8% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 294 aa
181-252

Region 181-252 0 PWM

Residues
72 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 181-2521 model
Actions
Predicted = Low DIMER_B4DZ50:181:252_2ypb_B_1 2ypb 181-252 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
190-243PF00010Helix-loop-helix DNA-binding domainoverlaps 181-252