Region 308-335 5 PWM
- Residues
- 28 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 5 active PDBs · 5 summary rows
- Templates
- 5VMV, 6DF5, 6DFA, 6DFB, 6DFC
- Sources
- Predicted = Low
Transcription factor
B4E0X7
Zinc finger protein 512
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 385 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_5vmv_A_1 | ModCRE | Homology model | GCGGCTTAAAC | Region 308-335 · 1 3D model | Open · Scan | |
| TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6df5_A_1 | ModCRE | Homology model | ACTGCTTAAGC | Region 308-335 · 1 3D model | Open · Scan | |
| TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfa_A_1 | ModCRE | Homology model | AGTTTCCATGC | Region 308-335 · 1 3D model | Open · Scan | |
| TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfb_A_1 | ModCRE | Homology model | AATTTCAATGC | Region 308-335 · 1 3D model | Open · Scan | |
| TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfc_A_1 | ModCRE | Homology model | GAGGCTTAAGC | Region 308-335 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
385 aa
308-335
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 308-3355 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_5vmv_A_1 | 5vmv | 308-335 | View model · PDB |
| Predicted = Low | TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6df5_A_1 | 6df5 | 308-335 | View model · PDB |
| Predicted = Low | TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfa_A_1 | 6dfa | 308-335 | View model · PDB |
| Predicted = Low | TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfb_A_1 | 6dfb | 308-335 | View model · PDB |
| Predicted = Low | TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfc_A_1 | 6dfc | 308-335 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 6dfb | 308:335 | 308 | 335 | P:A · DNA:D,E | 42.9% / 67.9% | 23 | View · PDB TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfb_A_1 |
| 2 | 6dfa | 308:335 | 308 | 335 | P:A · DNA:D,E | 42.9% / 67.9% | 23 | View · PDB TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfa_A_1 |
| 3 | 5vmv | 308:335 | 308 | 335 | P:A · DNA:D,E | 42.9% / 67.9% | 24 | View · PDB TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_5vmv_A_1 |
| 4 | 6dfc | 308:335 | 308 | 335 | P:A · DNA:D,E | 42.9% / 67.9% | 23 | View · PDB TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6dfc_A_1 |
| 5 | 6df5 | 308:335 | 308 | 335 | P:A · DNA:D,E | 42.9% / 67.9% | 24 | View · PDB TFS_tr_B4E0X7_B4E0X7_HUMAN:308:335_6df5_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 68-87 | PF21367 | Zinc finger 512, zinc fingers | No overlap with loaded model regions |
| 157-179 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 263-300 | PF21276 | Zinc finger protein 512, C2HC zinc finger | No overlap with loaded model regions |