ModCRE DB

Transcription factor

B5B0A5 - BCL6

Zinc finger transcription factor BCL6S

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 650 aa

42 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0463.2 NN 70+% JASPAR ATGCTTTCGAGGAATT 91.6% identity Open · Scan
MA0463.1 NN 70+% JASPAR TTTCCTAGAAAGCA 86.4% identity Open · Scan
Nearest Neighbor (70% - 40%)40
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 56.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 54.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 54.1% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 54.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.9% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 53.8% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 53.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 52.9% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.3% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 52.2% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.2% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 52.1% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.0% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 51.3% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 51.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.3% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 51.3% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 51.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 50.5% identity Open · Scan
M02731_2.00 NN 70-40% CisBP CACTTTCACTTT 50.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 50.4% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.4% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.4% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.4% identity Open · Scan
MA0508.1 NN 70-40% JASPAR AGAAAGTGAAAGTGA 50.4% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 50.4% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 650 aa
502-622

Region 502-622 0 PWM

Residues
121 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 502-6221 model
Actions
Predicted = Low TFS_B5B0A5:502:622_5wjq_D_1 5wjq 502-622 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
22-128PF00651BTB/POZ domainNo overlap with loaded model regions
518-540PF00096Zinc finger, C2H2 typeoverlaps 502-622
546-568PF00096Zinc finger, C2H2 typeoverlaps 502-622
574-596PF00096Zinc finger, C2H2 typeoverlaps 502-622