ModCRE DB

Transcription factor

B5BUG8 - KLF9

Kruppel-like factor 9

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 244 aa

65 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1107.1 NN 70+% JASPAR GGCCACACCCACC 99.5% identity Open · Scan
M00777_2.00 NN 70+% CisBP ACCGTTAT 96.3% identity Open · Scan
M02903_2.00 NN 70+% CisBP ATGCCACGCCCCTTTTTG 79.1% identity Open · Scan
MA0740.1 NN 70+% JASPAR GGCCACGCCCCCTT 75.2% identity Open · Scan
M04555_2.00 NN 70+% CisBP GCCACGCCCCCGCCACGCCCAC 72.8% identity Open · Scan
MA1512.1 NN 70+% JASPAR GCCACGCCCAC 72.8% identity Open · Scan
M03682_2.00 NN 70+% CisBP ACGCCACGCCCAGT 72.2% identity Open · Scan
MA1564.1 NN 70+% JASPAR GCCACGCCCCCC 72.2% identity Open · Scan
MA0747.1 NN 70+% JASPAR GCCACGCCCACT 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)56
MotifPredictionSourceDNA bindingSupportLogoActions
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 69.7% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 69.4% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 69.4% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 68.6% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 68.6% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 67.4% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 67.1% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 67.0% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 65.5% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 65.0% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 65.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 65.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 65.0% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 65.0% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 63.8% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 63.6% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 63.5% identity Open · Scan
M00954_2.00 NN 70-40% CisBP CTACCCTA 63.2% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 63.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 62.9% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 62.6% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 62.6% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 61.7% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 61.6% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 61.4% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 61.4% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 60.2% identity Open · Scan
M00951_2.00 NN 70-40% CisBP GCTGCACG 59.7% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 59.7% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 56.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 56.3% identity Open · Scan
M00036_2.00 NN 70-40% CisBP TACCCCTT 55.1% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 55.1% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 54.6% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 53.4% identity Open · Scan
M01032_2.00 NN 70-40% CisBP ACCCCTGA 53.0% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 53.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.8% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 52.7% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 52.5% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 52.4% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 51.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 51.7% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 51.6% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 51.3% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 51.3% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 50.9% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 50.5% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 50.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 50.0% identity Open · Scan
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 50.0% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 244 aa
143-225

Region 143-225 0 PWM

Residues
83 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1F
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 143-2251 model
Actions
Predicted = Low TFS_B5BUG8:143:225_1a1f_A_1 1a1f 143-225 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
143-167PF00096Zinc finger, C2H2 typeoverlaps 143-225
173-197PF00096Zinc finger, C2H2 typeoverlaps 143-225
203-225PF00096Zinc finger, C2H2 typeoverlaps 143-225