ModCRE DB

Transcription factor

B5TZ79 - ESR1

Estrogen receptor (ER-alpha) (Estradiol receptor) (Nuclear receptor subfamily 3 group A member 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 152 aa

65 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0258.1 NN 70+% JASPAR CAAGGTCACGGTGACCTG 83.1% identity Open · Scan
M09296_2.00 NN 70+% CisBP TCAAGGTCA 72.6% identity Open · Scan
MA0141.1 NN 70+% JASPAR AGCTCAAGGTCA 72.6% identity Open · Scan
MA0141.3 NN 70+% JASPAR TCAAGGTCATA 72.6% identity Open · Scan
MA0643.1 NN 70+% JASPAR TCAAGGTCAT 72.6% identity Open · Scan
Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 69.8% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 69.8% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 61.0% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 61.0% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 61.0% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 58.8% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 58.8% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 58.3% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 57.6% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 57.6% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 57.6% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 57.3% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 57.3% identity Open · Scan
MA0159.1 NN 70-40% JASPAR AGGTCACGGAGAGGTCA 57.3% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 57.3% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 57.3% identity Open · Scan
M03923_2.00 NN 70-40% CisBP AGAACACTGTGTACC 56.9% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 56.2% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 55.9% identity Open · Scan
M03432_2.00 NN 70-40% CisBP AAAGGTCAAGAGAGGTCA 55.8% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 55.5% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 54.2% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 54.2% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 54.2% identity Open · Scan
MA0115.1 NN 70-40% JASPAR AAAGGTCAAAGGTCAAC 54.0% identity Open · Scan
MA1110.1 NN 70-40% JASPAR TCAATGACCTA 53.3% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 52.9% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 52.9% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 52.7% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 52.7% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 52.7% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 52.7% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 52.7% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 52.7% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 52.5% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 52.5% identity Open · Scan
MA0494.1 NN 70-40% JASPAR TGACCTAAAGTAACCTCTG 52.5% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 52.4% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 52.0% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 51.4% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 51.4% identity Open · Scan
M09277_2.00 NN 70-40% CisBP GGGGGATCAAGAGGTCAAGG 51.2% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 51.0% identity Open · Scan
M03392_2.00 NN 70-40% CisBP AAGGTCAACTAAAGGTCA 50.9% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 50.8% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 50.8% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 50.8% identity Open · Scan
M11139_2.00 NN 70-40% CisBP AAGTAGGTCACCGTGACCTACTT 50.7% identity Open · Scan
MA0065.1 NN 70-40% JASPAR CCAGGGGTCAAAGGTCATCG 50.7% identity Open · Scan
MA0065.2 NN 70-40% JASPAR GTAGGGCAAAGGTCA 50.7% identity Open · Scan
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 50.7% identity Open · Scan
M00690_2.00 NN 70-40% CisBP AAAGATCAAA 50.0% identity Open · Scan
M00814_2.00 NN 70-40% CisBP AAAGTCAAAT 50.0% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 50.0% identity Open · Scan
M02408_2.00 NN 70-40% CisBP TGAGGTCAATTT 50.0% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 50.0% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 50.0% identity Open · Scan
MA0676.1 NN 70-40% JASPAR AAAAGTCAA 50.0% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 50.0% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 152 aa
1-59

Region 1-59 0 PWM

Residues
59 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1LAT
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-591 model
Actions
Predicted = Low DIMER_B5TZ79:1:59_1lat_B_1 1lat 1-59 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-61PF00105Double treble clef zinc finger, C4 typeoverlaps 1-59
123-152PF12743Oestrogen-type nuclear receptor final C-terminalNo overlap with loaded model regions