ModCRE DB

Transcription factor

B5TZ83 - ESR1

Estrogen receptor alpha splice variant

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 79 aa

44 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
M09309_2.00 NN 70+% CisBP AGGTCAGGGTGACCT 97.1% identity Open · Scan
MA0112.1 NN 70+% JASPAR CCAGGTCACCGTGACCCC 97.1% identity Open · Scan
MA0258.1 NN 70+% JASPAR CAAGGTCACGGTGACCTG 88.2% identity Open · Scan
M09296_2.00 NN 70+% CisBP TCAAGGTCA 70.5% identity Open · Scan
MA0141.1 NN 70+% JASPAR AGCTCAAGGTCA 70.5% identity Open · Scan
MA0141.3 NN 70+% JASPAR TCAAGGTCATA 70.5% identity Open · Scan
MA0643.1 NN 70+% JASPAR TCAAGGTCAT 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)37
MotifPredictionSourceDNA bindingSupportLogoActions
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 66.1% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 66.1% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 57.6% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 57.6% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 57.6% identity Open · Scan
M03923_2.00 NN 70-40% CisBP AGAACACTGTGTACC 56.9% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 56.4% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 56.4% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 56.4% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 55.4% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 55.4% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 54.6% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 54.5% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 54.2% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 54.2% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 54.0% identity Open · Scan
MA0159.1 NN 70-40% JASPAR AGGTCACGGAGAGGTCA 54.0% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 54.0% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 53.8% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 53.8% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 53.8% identity Open · Scan
M03432_2.00 NN 70-40% CisBP AAAGGTCAAGAGAGGTCA 53.3% identity Open · Scan
MA0494.1 NN 70-40% JASPAR TGACCTAAAGTAACCTCTG 53.3% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 53.1% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 52.6% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 52.6% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 52.3% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 52.3% identity Open · Scan
MA1110.1 NN 70-40% JASPAR TCAATGACCTA 51.6% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 51.4% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 51.4% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 51.4% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 51.4% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 51.4% identity Open · Scan
MA0115.1 NN 70-40% JASPAR AAAGGTCAAAGGTCAAC 50.8% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 50.7% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 79 aa
1-59

Region 1-59 0 PWM

Residues
59 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
3G6T
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-591 model
Actions
Predicted = Low DIMER_B5TZ83:1:59_3g6t_A_1 3g6t 1-59 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-61PF00105Double treble clef zinc finger, C4 typeoverlaps 1-59