ModCRE DB

Transcription factor

B6ZGU8 - NR5A1

Steroidogenic factor 1 (Nuclear receptor subfamily 5 group A member 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 461 aa

62 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA1540.1 NN 70+% JASPAR GTCAAGGTCAC 99.7% identity Open · Scan
M08226_2.00 NN 70+% CisBP CAAGGTCA 74.2% identity Open · Scan
Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 66.6% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 63.3% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 60.8% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 58.8% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 58.6% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 58.6% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 58.3% identity Open · Scan
MA1534.1 NN 70-40% JASPAR ATGAACTTT 58.3% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 57.8% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 57.8% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 57.8% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 57.8% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 57.3% identity Open · Scan
M03432_2.00 NN 70-40% CisBP AAAGGTCAAGAGAGGTCA 57.3% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 57.3% identity Open · Scan
MA0159.1 NN 70-40% JASPAR AGGTCACGGAGAGGTCA 57.3% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 57.3% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 57.3% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 56.9% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 56.9% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 56.9% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 56.5% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 56.5% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 56.5% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 56.5% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 56.5% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 55.9% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 55.8% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 55.8% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 55.5% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 55.2% identity Open · Scan
M05584_2.00 NN 70-40% CisBP AGAGGTCACGACCTCT 55.2% identity Open · Scan
MA1550.1 NN 70-40% JASPAR AGGGGTCAAAGGTCAA 55.2% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 54.5% identity Open · Scan
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 53.9% identity Open · Scan
M09277_2.00 NN 70-40% CisBP GGGGGATCAAGAGGTCAAGG 53.6% identity Open · Scan
M03392_2.00 NN 70-40% CisBP AAGGTCAACTAAAGGTCA 53.5% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 53.4% identity Open · Scan
MA0258.1 NN 70-40% JASPAR CAAGGTCACGGTGACCTG 53.0% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 52.8% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 52.8% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 52.8% identity Open · Scan
M11139_2.00 NN 70-40% CisBP AAGTAGGTCACCGTGACCTACTT 52.6% identity Open · Scan
MA0065.1 NN 70-40% JASPAR CCAGGGGTCAAAGGTCATCG 52.6% identity Open · Scan
MA0065.2 NN 70-40% JASPAR GTAGGGCAAAGGTCA 52.6% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 52.5% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 52.5% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 52.5% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 52.5% identity Open · Scan
MA1110.1 NN 70-40% JASPAR TCAATGACCTA 52.1% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 51.9% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 51.9% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 51.9% identity Open · Scan
M02413_2.00 NN 70-40% CisBP CGAGATCAA 51.8% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 51.3% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 51.3% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 51.3% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 51.2% identity Open · Scan
MA0494.1 NN 70-40% JASPAR TGACCTAAAGTAACCTCTG 50.6% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 461 aa
12-85

Region 12-85 0 PWM

Residues
74 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0N
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 12-851 model
Actions
Predicted = Low DIMER_B6ZGU8:12:85_1r0n_A_1 1r0n 12-85 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
12-79PF00105Double treble clef zinc finger, C4 typeoverlaps 12-85
256-438PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions