ModCRE DB

Transcription factor

B7Z1I8

cDNA FLJ56713, highly similar to Transcription factor E2F6

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 133 aa

15 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0471.1 NN 70+% JASPAR GGGCGGGAAGG 99.2% identity Open · Scan
M08107_2.00 NN 70+% CisBP GGGCGGGAAGG 98.0% identity Open · Scan
Nearest Neighbor (70% - 40%)13
MotifPredictionSourceDNA bindingSupportLogoActions
M01225_2.00 NN 70-40% CisBP GGCGCCAAAT 64.0% identity Open · Scan
M01968_2.00 NN 70-40% CisBP GCGCGCCAAA 64.0% identity Open · Scan
MA0470.1 NN 70-40% JASPAR GGGCGGGAAGG 58.4% identity Open · Scan
M08196_2.00 NN 70-40% CisBP AAATGCGCGCCAA 57.5% identity Open · Scan
M06871_2.00 NN 70-40% CisBP ATTTGGCGCCAAAA 57.1% identity Open · Scan
M01962_2.00 NN 70-40% CisBP TTGGCGCCAA 56.7% identity Open · Scan
MA0469.1 NN 70-40% JASPAR CTCCCGCCCCCACTC 56.3% identity Open · Scan
MA0469.2 NN 70-40% JASPAR AAAAATGGCGCCATTTTT 56.3% identity Open · Scan
M01963_2.00 NN 70-40% CisBP TTGGCGCCAA 55.2% identity Open · Scan
M09039_2.00 NN 70-40% CisBP GGCGCGAAAC 55.2% identity Open · Scan
M09526_2.00 NN 70-40% CisBP TGCAAACGCGCTCCA 53.8% identity Open · Scan
MA0864.1 NN 70-40% JASPAR AAAATGGCGCCATTTT 53.7% identity Open · Scan
M01965_2.00 NN 70-40% CisBP TTGGCGCGC 52.2% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 133 aa
100-129

Region 100-129 0 PWM

Residues
30 aa
Domains
PF02319 · E2F/DP family winged-helix DNA-binding domain
3D models
1 active PDB
Templates
1CF7
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 100-1291 model
Actions
Predicted = Low TFS_B7Z1I8:100:129_1cf7_B_1 1cf7 100-129 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
65-127PF02319E2F/DP family winged-helix DNA-binding domainoverlaps 100-129