ModCRE DB

Transcription factor

B7Z1N1

cDNA FLJ57718, highly similar to Zinc finger protein 671

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 436 aa

44 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07567_2.00 NN 70+% CisBP CCACTCCACTCA 99.7% identity Open · Scan
Nearest Neighbor (70% - 40%)43
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 60.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 60.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 57.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 57.4% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 57.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 56.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 56.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 56.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 55.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 54.9% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 54.6% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 54.4% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 54.0% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 53.3% identity Open · Scan
M01447_2.00 NN 70-40% CisBP TACCCCTGA 52.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 51.6% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 51.5% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 51.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 50.9% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.5% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.3% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 50.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 436 aa
184-431

Region 184-431 0 PWM

Residues
248 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 184-4311 model
Actions
Predicted = Low TFS_B7Z1N1:184:431_5wjq_D_1 5wjq 184-431 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
187-209PF00096Zinc finger, C2H2 typeoverlaps 184-431
215-237PF00096Zinc finger, C2H2 typeoverlaps 184-431
243-265PF00096Zinc finger, C2H2 typeoverlaps 184-431
271-293PF00096Zinc finger, C2H2 typeoverlaps 184-431
299-321PF00096Zinc finger, C2H2 typeoverlaps 184-431
327-349PF00096Zinc finger, C2H2 typeoverlaps 184-431
381-403PF00096Zinc finger, C2H2 typeoverlaps 184-431
409-431PF00096Zinc finger, C2H2 typeoverlaps 184-431