ModCRE DB

Transcription factor

B7Z1R4

cDNA FLJ50459, highly similar to ETS translocation variant 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 374 aa

38 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M09046_2.00 NN 70+% CisBP GGCCGGAAGTG 84.6% identity Open · Scan
MA0761.1 NN 70+% JASPAR ACCGGAAGTA 84.6% identity Open · Scan
Nearest Neighbor (70% - 40%)36
MotifPredictionSourceDNA bindingSupportLogoActions
M06192_2.00 NN 70-40% CisBP ACCGGAAAT 64.6% identity Open · Scan
MA1484.1 NN 70-40% JASPAR GACCGGAAGT 64.0% identity Open · Scan
M01493_2.00 NN 70-40% CisBP AACCGGAAGT 63.4% identity Open · Scan
MA0098.1 NN 70-40% JASPAR CTTCCG 63.4% identity Open · Scan
MA0098.2 NN 70-40% JASPAR CCCACTTCCTGTCTC 63.4% identity Open · Scan
M06188_2.00 NN 70-40% CisBP ACCGGAAAT 62.1% identity Open · Scan
M01489_2.00 NN 70-40% CisBP AACCGGAAGT 61.3% identity Open · Scan
MA0028.1 NN 70-40% JASPAR GAGCCGGAAG 60.9% identity Open · Scan
M04773_2.00 NN 70-40% CisBP AACCGGATATCCGGTT 60.6% identity Open · Scan
M09081_2.00 NN 70-40% CisBP GGACCGGAAGTGGG 60.6% identity Open · Scan
MA0156.1 NN 70-40% JASPAR CAGGAAAT 60.6% identity Open · Scan
MA0474.1 NN 70-40% JASPAR ACAGGAAGTGG 60.6% identity Open · Scan
MA0474.2 NN 70-40% JASPAR ACCGGAAGTG 60.6% identity Open · Scan
M03001_2.00 NN 70-40% CisBP ACCGGAAGTG 60.2% identity Open · Scan
MA0076.1 NN 70-40% JASPAR ACCGGAAGT 60.2% identity Open · Scan
M09539_2.00 NN 70-40% CisBP ACCGGAAGTG 58.5% identity Open · Scan
MA0149.1 NN 70-40% JASPAR GGAAGGAAGGAAGGAAGG 58.5% identity Open · Scan
MA0475.1 NN 70-40% JASPAR ACAGGAAGTGG 58.5% identity Open · Scan
M04733_2.00 NN 70-40% CisBP ACCGGAAGTG 56.8% identity Open · Scan
MA0759.1 NN 70-40% JASPAR ACCGGAAGTA 56.8% identity Open · Scan
M00157_2.00 NN 70-40% CisBP AACCGGAAGT 56.1% identity Open · Scan
MA0062.1 NN 70-40% JASPAR ACCGGAAGAG 56.1% identity Open · Scan
MA0062.2 NN 70-40% JASPAR CCGGAAGTGGC 56.1% identity Open · Scan
M03010_2.00 NN 70-40% CisBP ACCGGAAGTA 55.6% identity Open · Scan
M04793_2.00 NN 70-40% CisBP GACCGGAAGTG 55.2% identity Open · Scan
MA0764.1 NN 70-40% JASPAR ACCGGAAGTA 55.2% identity Open · Scan
MA0686.1 NN 70-40% JASPAR ACCCGGATGTA 54.7% identity Open · Scan
M09073_2.00 NN 70-40% CisBP CAGGAAGT 54.2% identity Open · Scan
MA0765.1 NN 70-40% JASPAR ACCGGAAGTG 54.1% identity Open · Scan
M01488_2.00 NN 70-40% CisBP AAACCGGATA 53.5% identity Open · Scan
M03726_2.00 NN 70-40% CisBP GACCGGAAGTG 53.0% identity Open · Scan
MA0763.1 NN 70-40% JASPAR ACCGGAAGTG 53.0% identity Open · Scan
M04744_2.00 NN 70-40% CisBP AACCCGGAAGTA 52.6% identity Open · Scan
MA0762.1 NN 70-40% JASPAR AACCGGAAATA 50.5% identity Open · Scan
M06185_2.00 NN 70-40% CisBP ACCGGAAGT 50.0% identity Open · Scan
M09048_2.00 NN 70-40% CisBP GGAAACAGGAAGTGGG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 374 aa
226-318

Region 226-318 0 PWM

Residues
93 aa
Domains
PF04621 · PEA3 subfamily ETS-domain transcription factor N terminal domain PF00178 · Ets-domain
3D models
1 active PDB
Templates
2NNY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 226-3181 model
Actions
Predicted = Low DIMER_B7Z1R4:226:318_2nny_B_1 2nny 226-318 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
21-80PF04621PEA3 subfamily ETS-domain transcription factor N terminal domainNo overlap with loaded model regions
81-230PF04621PEA3 subfamily ETS-domain transcription factor N terminal domainoverlaps 226-318
232-312PF00178Ets-domainoverlaps 226-318