ModCRE DB

Transcription factor

B7Z2H6

cDNA FLJ59682, highly similar to Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Member of PAS protein 4) (MOP4)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 889 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M04158_2.00 NN 70+% CisBP TACACGTGTC 99.7% identity Open · Scan
M01731_2.00 NN 70+% CisBP GGCACGTGTC 87.6% identity Open · Scan
MA0626.1 NN 70+% JASPAR GGCACGTGTC 87.5% identity Open · Scan
Nearest Neighbor (70% - 40%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA0819.1 NN 70-40% JASPAR AACACGTGTT 63.7% identity Open · Scan
M01735_2.00 NN 70-40% CisBP GCCACGTGGC 54.9% identity Open · Scan
M05973_2.00 NN 70-40% CisBP CACGTGGC 50.9% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 889 aa
68-122

Region 68-122 0 PWM

Residues
55 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 68-1221 model
Actions
Predicted = Low DIMER_B7Z2H6:68:122_1hlo_A_1 1hlo 68-122 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
75-122PF00010Helix-loop-helix DNA-binding domainoverlaps 68-122
150-221PF00989PAS foldNo overlap with loaded model regions
314-417PF14598PAS domainNo overlap with loaded model regions